Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Slc35b2-202ENSMUST00000223987 1766 ntBASIC9.26□□□□□ -0.93
Cystm1Q8K353 Gm5639-201ENSMUST00000122305 2403 ntBASIC9.26□□□□□ -0.93
Cystm1Q8K353 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cystm1Q8K353 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Cystm1Q8K353 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Zfp264-201ENSMUST00000208656 1563 ntBASIC9.25□□□□□ -0.93
Cystm1Q8K353 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Gm44414-201ENSMUST00000203660 2109 ntBASIC9.25□□□□□ -0.93
Cystm1Q8K353 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cystm1Q8K353 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Gm18421-201ENSMUST00000204122 625 ntBASIC9.25□□□□□ -0.93
Cystm1Q8K353 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cystm1Q8K353 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Cystm1Q8K353 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Cystm1Q8K353 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cystm1Q8K353 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
Cystm1Q8K353 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC9.24□□□□□ -0.93
Cystm1Q8K353 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cystm1Q8K353 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cystm1Q8K353 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cystm1Q8K353 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC9.24□□□□□ -0.93
Cystm1Q8K353 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cystm1Q8K353 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC9.24□□□□□ -0.93
Cystm1Q8K353 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cystm1Q8K353 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC9.24□□□□□ -0.93
Cystm1Q8K353 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cystm1Q8K353 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cystm1Q8K353 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC9.24□□□□□ -0.93
Cystm1Q8K353 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC9.24□□□□□ -0.93
Cystm1Q8K353 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC9.24□□□□□ -0.93
Cystm1Q8K353 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cystm1Q8K353 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cystm1Q8K353 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cystm1Q8K353 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC9.24□□□□□ -0.93
Cystm1Q8K353 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cystm1Q8K353 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cystm1Q8K353 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms