Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 Gm27301-201ENSMUST00000184012 127 ntBASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 Gm44492-201ENSMUST00000197012 141 ntBASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3rf3Q8C120 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.31■□□□□ 0.04
Sh3rf3Q8C120 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3rf3Q8C120 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3rf3Q8C120 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3rf3Q8C120 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3rf3Q8C120 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3rf3Q8C120 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3rf3Q8C120 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.3■□□□□ 0.04
Sh3rf3Q8C120 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.3■□□□□ 0.04
Sh3rf3Q8C120 Gm2272-201ENSMUST00000194903 582 ntBASIC15.3■□□□□ 0.04
Sh3rf3Q8C120 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.3■□□□□ 0.04
Sh3rf3Q8C120 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.3■□□□□ 0.04
Sh3rf3Q8C120 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Sh3rf3Q8C120 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3rf3Q8C120 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3rf3Q8C120 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3rf3Q8C120 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3rf3Q8C120 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3rf3Q8C120 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3rf3Q8C120 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Sh3rf3Q8C120 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sh3rf3Q8C120 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Sh3rf3Q8C120 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3rf3Q8C120 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.29■□□□□ 0.04
Sh3rf3Q8C120 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms