Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn3bQ8BHK2 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn3bQ8BHK2 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Scn3bQ8BHK2 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Gm11950-201ENSMUST00000121615 838 ntBASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Scn3bQ8BHK2 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn3bQ8BHK2 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn3bQ8BHK2 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Scn3bQ8BHK2 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn3bQ8BHK2 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.66□□□□□ -0.22
Scn3bQ8BHK2 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn3bQ8BHK2 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn3bQ8BHK2 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn3bQ8BHK2 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn3bQ8BHK2 Gm15358-201ENSMUST00000119249 520 ntBASIC13.66□□□□□ -0.22
Scn3bQ8BHK2 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn3bQ8BHK2 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.66□□□□□ -0.22
Scn3bQ8BHK2 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn3bQ8BHK2 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn3bQ8BHK2 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn3bQ8BHK2 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Scn3bQ8BHK2 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Scn3bQ8BHK2 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn3bQ8BHK2 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn3bQ8BHK2 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.66□□□□□ -0.22
Scn3bQ8BHK2 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn3bQ8BHK2 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Scn3bQ8BHK2 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn3bQ8BHK2 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn3bQ8BHK2 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn3bQ8BHK2 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn3bQ8BHK2 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn3bQ8BHK2 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.66□□□□□ -0.22
Scn3bQ8BHK2 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn3bQ8BHK2 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn3bQ8BHK2 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Scn3bQ8BHK2 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Scn3bQ8BHK2 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scn3bQ8BHK2 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn3bQ8BHK2 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.65□□□□□ -0.22
Scn3bQ8BHK2 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn3bQ8BHK2 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn3bQ8BHK2 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn3bQ8BHK2 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scn3bQ8BHK2 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn3bQ8BHK2 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn3bQ8BHK2 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.65□□□□□ -0.22
Scn3bQ8BHK2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn3bQ8BHK2 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn3bQ8BHK2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.65□□□□□ -0.22
Scn3bQ8BHK2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Scn3bQ8BHK2 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.65□□□□□ -0.22
Scn3bQ8BHK2 Gm12497-201ENSMUST00000138778 237 ntBASIC13.65□□□□□ -0.22
Scn3bQ8BHK2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scn3bQ8BHK2 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.65□□□□□ -0.22
Scn3bQ8BHK2 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Scn3bQ8BHK2 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scn3bQ8BHK2 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Scn3bQ8BHK2 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms