Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trnp1Q80ZI1 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trnp1Q80ZI1 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trnp1Q80ZI1 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trnp1Q80ZI1 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trnp1Q80ZI1 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trnp1Q80ZI1 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC16.43■□□□□ 0.22
Trnp1Q80ZI1 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trnp1Q80ZI1 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.43■□□□□ 0.22
Trnp1Q80ZI1 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trnp1Q80ZI1 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trnp1Q80ZI1 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 Gm8062-201ENSMUST00000139696 444 ntBASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 Gm27486-201ENSMUST00000184923 80 ntBASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 Gm37424-201ENSMUST00000191727 561 ntBASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 Gm5425-201ENSMUST00000214125 459 ntBASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 Gm10478-201ENSMUST00000084451 396 ntBASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trnp1Q80ZI1 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trnp1Q80ZI1 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trnp1Q80ZI1 Prob1-201ENSMUST00000097619 3021 ntBASIC16.41■□□□□ 0.22
Trnp1Q80ZI1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trnp1Q80ZI1 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Trnp1Q80ZI1 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.41■□□□□ 0.22
Trnp1Q80ZI1 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trnp1Q80ZI1 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trnp1Q80ZI1 Mir1247-201ENSMUST00000116706 82 ntBASIC16.41■□□□□ 0.22
Trnp1Q80ZI1 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trnp1Q80ZI1 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trnp1Q80ZI1 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trnp1Q80ZI1 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trnp1Q80ZI1 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trnp1Q80ZI1 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC16.41■□□□□ 0.22
Trnp1Q80ZI1 Gm2495-201ENSMUST00000191160 466 ntBASIC16.41■□□□□ 0.22
Trnp1Q80ZI1 Gm38230-201ENSMUST00000193572 1159 ntBASIC16.41■□□□□ 0.22
Trnp1Q80ZI1 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trnp1Q80ZI1 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trnp1Q80ZI1 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trnp1Q80ZI1 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trnp1Q80ZI1 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trnp1Q80ZI1 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.41■□□□□ 0.22
Trnp1Q80ZI1 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trnp1Q80ZI1 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Trnp1Q80ZI1 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trnp1Q80ZI1 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trnp1Q80ZI1 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trnp1Q80ZI1 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Trnp1Q80ZI1 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trnp1Q80ZI1 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trnp1Q80ZI1 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trnp1Q80ZI1 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trnp1Q80ZI1 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trnp1Q80ZI1 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trnp1Q80ZI1 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trnp1Q80ZI1 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trnp1Q80ZI1 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trnp1Q80ZI1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trnp1Q80ZI1 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trnp1Q80ZI1 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trnp1Q80ZI1 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trnp1Q80ZI1 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trnp1Q80ZI1 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC16.4■□□□□ 0.22
Trnp1Q80ZI1 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trnp1Q80ZI1 Gm17420-201ENSMUST00000164753 153 ntBASIC16.4■□□□□ 0.22
Trnp1Q80ZI1 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trnp1Q80ZI1 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC16.4■□□□□ 0.22
Trnp1Q80ZI1 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trnp1Q80ZI1 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms