Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh19Q80TF3 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Pcdh19Q80TF3 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh19Q80TF3 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Pcdh19Q80TF3 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh19Q80TF3 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh19Q80TF3 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Pcdh19Q80TF3 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
Pcdh19Q80TF3 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Pcdh19Q80TF3 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh19Q80TF3 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh19Q80TF3 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh19Q80TF3 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh19Q80TF3 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh19Q80TF3 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Pcdh19Q80TF3 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Pcdh19Q80TF3 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 Gm13464-201ENSMUST00000119418 935 ntBASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 Gm15693-201ENSMUST00000120470 637 ntBASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 Mir7023-201ENSMUST00000185093 64 ntBASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 BC037039-201ENSMUST00000192003 2205 ntBASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh19Q80TF3 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh19Q80TF3 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh19Q80TF3 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh19Q80TF3 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Pcdh19Q80TF3 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh19Q80TF3 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh19Q80TF3 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Pcdh19Q80TF3 Gm5479-201ENSMUST00000160578 435 ntBASIC14.4□□□□□ -0.1
Pcdh19Q80TF3 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.4□□□□□ -0.1
Pcdh19Q80TF3 Gm45098-201ENSMUST00000207179 657 ntBASIC14.4□□□□□ -0.1
Pcdh19Q80TF3 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh19Q80TF3 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.4□□□□□ -0.1
Pcdh19Q80TF3 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh19Q80TF3 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh19Q80TF3 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Pcdh19Q80TF3 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh19Q80TF3 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh19Q80TF3 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh19Q80TF3 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh19Q80TF3 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh19Q80TF3 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh19Q80TF3 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Pcdh19Q80TF3 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Pcdh19Q80TF3 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh19Q80TF3 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Pcdh19Q80TF3 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Pcdh19Q80TF3 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh19Q80TF3 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh19Q80TF3 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh19Q80TF3 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh19Q80TF3 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh19Q80TF3 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh19Q80TF3 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh19Q80TF3 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh19Q80TF3 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdh19Q80TF3 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh19Q80TF3 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh19Q80TF3 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.39□□□□□ -0.11
Pcdh19Q80TF3 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh19Q80TF3 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh19Q80TF3 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh19Q80TF3 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.39□□□□□ -0.11
Pcdh19Q80TF3 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh19Q80TF3 Gm27622-201ENSMUST00000183779 60 ntBASIC14.39□□□□□ -0.11
Pcdh19Q80TF3 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms