Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC18.9■□□□□ 0.62
Chd4Q6PDQ2 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chd4Q6PDQ2 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chd4Q6PDQ2 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Chd4Q6PDQ2 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chd4Q6PDQ2 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Chd4Q6PDQ2 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Chd4Q6PDQ2 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chd4Q6PDQ2 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Chd4Q6PDQ2 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chd4Q6PDQ2 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chd4Q6PDQ2 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chd4Q6PDQ2 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chd4Q6PDQ2 Gm9115-201ENSMUST00000120192 1348 ntBASIC18.9■□□□□ 0.62
Chd4Q6PDQ2 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.9■□□□□ 0.62
Chd4Q6PDQ2 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chd4Q6PDQ2 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC18.9■□□□□ 0.62
Chd4Q6PDQ2 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chd4Q6PDQ2 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chd4Q6PDQ2 Gm8602-201ENSMUST00000184045 607 ntBASIC18.9■□□□□ 0.62
Chd4Q6PDQ2 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC18.9■□□□□ 0.62
Chd4Q6PDQ2 Gm6266-201ENSMUST00000203844 806 ntBASIC18.9■□□□□ 0.62
Chd4Q6PDQ2 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chd4Q6PDQ2 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chd4Q6PDQ2 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Chd4Q6PDQ2 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Chd4Q6PDQ2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Chd4Q6PDQ2 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Chd4Q6PDQ2 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chd4Q6PDQ2 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Chd4Q6PDQ2 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chd4Q6PDQ2 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chd4Q6PDQ2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chd4Q6PDQ2 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Chd4Q6PDQ2 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC18.89■□□□□ 0.61
Chd4Q6PDQ2 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Chd4Q6PDQ2 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC18.89■□□□□ 0.61
Chd4Q6PDQ2 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chd4Q6PDQ2 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chd4Q6PDQ2 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Chd4Q6PDQ2 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC18.89■□□□□ 0.61
Chd4Q6PDQ2 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
Chd4Q6PDQ2 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chd4Q6PDQ2 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chd4Q6PDQ2 AC166574.6-201ENSMUST00000227889 1806 ntBASIC18.88■□□□□ 0.61
Chd4Q6PDQ2 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Chd4Q6PDQ2 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chd4Q6PDQ2 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC18.88■□□□□ 0.61
Chd4Q6PDQ2 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chd4Q6PDQ2 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC18.88■□□□□ 0.61
Chd4Q6PDQ2 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chd4Q6PDQ2 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC18.88■□□□□ 0.61
Chd4Q6PDQ2 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Chd4Q6PDQ2 Gm26464-201ENSMUST00000157094 305 ntBASIC18.88■□□□□ 0.61
Chd4Q6PDQ2 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC18.88■□□□□ 0.61
Chd4Q6PDQ2 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chd4Q6PDQ2 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC18.88■□□□□ 0.61
Chd4Q6PDQ2 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Chd4Q6PDQ2 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chd4Q6PDQ2 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC18.88■□□□□ 0.61
Chd4Q6PDQ2 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Chd4Q6PDQ2 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chd4Q6PDQ2 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Chd4Q6PDQ2 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd4Q6PDQ2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd4Q6PDQ2 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd4Q6PDQ2 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd4Q6PDQ2 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd4Q6PDQ2 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd4Q6PDQ2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
Chd4Q6PDQ2 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd4Q6PDQ2 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Chd4Q6PDQ2 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd4Q6PDQ2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd4Q6PDQ2 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd4Q6PDQ2 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chd4Q6PDQ2 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd4Q6PDQ2 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Chd4Q6PDQ2 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC18.86■□□□□ 0.61
Chd4Q6PDQ2 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd4Q6PDQ2 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC18.86■□□□□ 0.61
Chd4Q6PDQ2 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd4Q6PDQ2 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd4Q6PDQ2 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd4Q6PDQ2 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd4Q6PDQ2 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Chd4Q6PDQ2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chd4Q6PDQ2 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd4Q6PDQ2 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd4Q6PDQ2 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Chd4Q6PDQ2 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd4Q6PDQ2 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd4Q6PDQ2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd4Q6PDQ2 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Chd4Q6PDQ2 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chd4Q6PDQ2 Gm17150-201ENSMUST00000165577 381 ntBASIC18.86■□□□□ 0.61
Chd4Q6PDQ2 AC125350.2-201ENSMUST00000224737 727 ntBASIC18.86■□□□□ 0.61
Chd4Q6PDQ2 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Chd4Q6PDQ2 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd4Q6PDQ2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms