Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Gm23243-201ENSMUST00000180047 110 ntBASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Gm24659-201ENSMUST00000180212 110 ntBASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Gm24169-201ENSMUST00000180244 110 ntBASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Gm23689-201ENSMUST00000180354 110 ntBASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Gm27359-201ENSMUST00000184153 110 ntBASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Gm27785-201ENSMUST00000184268 110 ntBASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Gm27466-201ENSMUST00000184396 110 ntBASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Gm27703-201ENSMUST00000184836 110 ntBASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgb4Q6P8W9 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb4Q6P8W9 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb4Q6P8W9 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb4Q6P8W9 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb4Q6P8W9 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb4Q6P8W9 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.41■□□□□ 0.06
Hmgb4Q6P8W9 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb4Q6P8W9 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.41■□□□□ 0.06
Hmgb4Q6P8W9 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb4Q6P8W9 Gm13127-201ENSMUST00000118978 1389 ntBASIC15.41■□□□□ 0.06
Hmgb4Q6P8W9 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb4Q6P8W9 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.41■□□□□ 0.06
Hmgb4Q6P8W9 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb4Q6P8W9 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Hmgb4Q6P8W9 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb4Q6P8W9 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb4Q6P8W9 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb4Q6P8W9 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb4Q6P8W9 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb4Q6P8W9 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Hmgb4Q6P8W9 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Hmgb4Q6P8W9 Mir7023-201ENSMUST00000185093 64 ntBASIC15.41■□□□□ 0.06
Hmgb4Q6P8W9 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.41■□□□□ 0.06
Hmgb4Q6P8W9 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.41■□□□□ 0.06
Hmgb4Q6P8W9 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.41■□□□□ 0.06
Hmgb4Q6P8W9 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb4Q6P8W9 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb4Q6P8W9 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Hmgb4Q6P8W9 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb4Q6P8W9 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb4Q6P8W9 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb4Q6P8W9 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Hmgb4Q6P8W9 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb4Q6P8W9 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb4Q6P8W9 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb4Q6P8W9 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb4Q6P8W9 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb4Q6P8W9 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb4Q6P8W9 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb4Q6P8W9 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb4Q6P8W9 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb4Q6P8W9 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Hmgb4Q6P8W9 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb4Q6P8W9 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.4■□□□□ 0.06
Hmgb4Q6P8W9 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Hmgb4Q6P8W9 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb4Q6P8W9 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.4■□□□□ 0.06
Hmgb4Q6P8W9 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb4Q6P8W9 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.4■□□□□ 0.06
Hmgb4Q6P8W9 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb4Q6P8W9 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.4■□□□□ 0.06
Hmgb4Q6P8W9 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb4Q6P8W9 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb4Q6P8W9 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb4Q6P8W9 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb4Q6P8W9 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb4Q6P8W9 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb4Q6P8W9 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb4Q6P8W9 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.4■□□□□ 0.06
Hmgb4Q6P8W9 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb4Q6P8W9 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb4Q6P8W9 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb4Q6P8W9 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Hmgb4Q6P8W9 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb4Q6P8W9 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb4Q6P8W9 Efs-202ENSMUST00000227037 2540 ntBASIC15.4■□□□□ 0.06
Hmgb4Q6P8W9 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.06
Hmgb4Q6P8W9 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgb4Q6P8W9 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgb4Q6P8W9 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Hmgb4Q6P8W9 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgb4Q6P8W9 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgb4Q6P8W9 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Hmgb4Q6P8W9 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgb4Q6P8W9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgb4Q6P8W9 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgb4Q6P8W9 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgb4Q6P8W9 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgb4Q6P8W9 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgb4Q6P8W9 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Hmgb4Q6P8W9 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgb4Q6P8W9 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms