Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Abcf1Q6P542 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Abcf1Q6P542 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Abcf1Q6P542 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.48■□□□□ 0.23
Abcf1Q6P542 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Abcf1Q6P542 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Abcf1Q6P542 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abcf1Q6P542 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Abcf1Q6P542 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Abcf1Q6P542 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.47■□□□□ 0.23
Abcf1Q6P542 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Abcf1Q6P542 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.47■□□□□ 0.23
Abcf1Q6P542 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.47■□□□□ 0.23
Abcf1Q6P542 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.47■□□□□ 0.23
Abcf1Q6P542 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.47■□□□□ 0.23
Abcf1Q6P542 Gm12350-201ENSMUST00000121208 462 ntBASIC16.47■□□□□ 0.23
Abcf1Q6P542 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.47■□□□□ 0.23
Abcf1Q6P542 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Abcf1Q6P542 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.47■□□□□ 0.23
Abcf1Q6P542 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.47■□□□□ 0.23
Abcf1Q6P542 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.47■□□□□ 0.23
Abcf1Q6P542 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Abcf1Q6P542 Gm27646-201ENSMUST00000183989 110 ntBASIC16.47■□□□□ 0.23
Abcf1Q6P542 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.47■□□□□ 0.23
Abcf1Q6P542 Gm43514-201ENSMUST00000198852 424 ntBASIC16.47■□□□□ 0.23
Abcf1Q6P542 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abcf1Q6P542 Gm45691-201ENSMUST00000206905 1120 ntBASIC16.47■□□□□ 0.23
Abcf1Q6P542 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Abcf1Q6P542 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abcf1Q6P542 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abcf1Q6P542 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Abcf1Q6P542 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abcf1Q6P542 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Abcf1Q6P542 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abcf1Q6P542 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abcf1Q6P542 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Abcf1Q6P542 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.47■□□□□ 0.23
Abcf1Q6P542 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abcf1Q6P542 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abcf1Q6P542 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abcf1Q6P542 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abcf1Q6P542 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.47■□□□□ 0.23
Abcf1Q6P542 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abcf1Q6P542 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abcf1Q6P542 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abcf1Q6P542 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Abcf1Q6P542 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Abcf1Q6P542 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Abcf1Q6P542 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Abcf1Q6P542 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Abcf1Q6P542 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Abcf1Q6P542 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Abcf1Q6P542 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Abcf1Q6P542 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Abcf1Q6P542 Gm15358-201ENSMUST00000119249 520 ntBASIC16.46■□□□□ 0.23
Abcf1Q6P542 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.46■□□□□ 0.23
Abcf1Q6P542 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.46■□□□□ 0.23
Abcf1Q6P542 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Abcf1Q6P542 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Abcf1Q6P542 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Abcf1Q6P542 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Abcf1Q6P542 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Abcf1Q6P542 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Abcf1Q6P542 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Abcf1Q6P542 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.46■□□□□ 0.23
Abcf1Q6P542 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Abcf1Q6P542 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Abcf1Q6P542 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Abcf1Q6P542 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Abcf1Q6P542 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Abcf1Q6P542 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Abcf1Q6P542 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Abcf1Q6P542 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Abcf1Q6P542 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.45■□□□□ 0.22
Abcf1Q6P542 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.45■□□□□ 0.22
Abcf1Q6P542 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Abcf1Q6P542 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
Abcf1Q6P542 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Abcf1Q6P542 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Abcf1Q6P542 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Abcf1Q6P542 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.45■□□□□ 0.22
Abcf1Q6P542 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.45■□□□□ 0.22
Abcf1Q6P542 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Abcf1Q6P542 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
Abcf1Q6P542 Gm44882-201ENSMUST00000205702 802 ntBASIC16.45■□□□□ 0.22
Abcf1Q6P542 Gm18206-201ENSMUST00000207027 926 ntBASIC16.45■□□□□ 0.22
Abcf1Q6P542 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.45■□□□□ 0.22
Abcf1Q6P542 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.45■□□□□ 0.22
Abcf1Q6P542 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Abcf1Q6P542 Gm15590-201ENSMUST00000078419 552 ntBASIC16.45■□□□□ 0.22
Abcf1Q6P542 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Abcf1Q6P542 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Abcf1Q6P542 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Abcf1Q6P542 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Abcf1Q6P542 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Abcf1Q6P542 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Abcf1Q6P542 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Abcf1Q6P542 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Abcf1Q6P542 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Abcf1Q6P542 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms