Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Gm18057-201ENSMUST00000208220 503 ntBASIC15.19■□□□□ 0.02
Rtl3Q6P1Y1 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.19■□□□□ 0.02
Rtl3Q6P1Y1 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rtl3Q6P1Y1 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Rtl3Q6P1Y1 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtl3Q6P1Y1 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rtl3Q6P1Y1 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtl3Q6P1Y1 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtl3Q6P1Y1 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtl3Q6P1Y1 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtl3Q6P1Y1 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Rtl3Q6P1Y1 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.19■□□□□ 0.02
Rtl3Q6P1Y1 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtl3Q6P1Y1 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtl3Q6P1Y1 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtl3Q6P1Y1 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtl3Q6P1Y1 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.18■□□□□ 0.02
Rtl3Q6P1Y1 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rtl3Q6P1Y1 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Rtl3Q6P1Y1 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtl3Q6P1Y1 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtl3Q6P1Y1 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rtl3Q6P1Y1 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rtl3Q6P1Y1 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.18■□□□□ 0.02
Rtl3Q6P1Y1 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rtl3Q6P1Y1 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtl3Q6P1Y1 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Rtl3Q6P1Y1 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Rtl3Q6P1Y1 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtl3Q6P1Y1 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rtl3Q6P1Y1 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.18■□□□□ 0.02
Rtl3Q6P1Y1 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtl3Q6P1Y1 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rtl3Q6P1Y1 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtl3Q6P1Y1 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtl3Q6P1Y1 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.18■□□□□ 0.02
Rtl3Q6P1Y1 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtl3Q6P1Y1 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rtl3Q6P1Y1 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rtl3Q6P1Y1 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtl3Q6P1Y1 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtl3Q6P1Y1 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtl3Q6P1Y1 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtl3Q6P1Y1 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtl3Q6P1Y1 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtl3Q6P1Y1 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rtl3Q6P1Y1 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.17■□□□□ 0.02
Rtl3Q6P1Y1 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtl3Q6P1Y1 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtl3Q6P1Y1 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtl3Q6P1Y1 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.17■□□□□ 0.02
Rtl3Q6P1Y1 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtl3Q6P1Y1 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtl3Q6P1Y1 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rtl3Q6P1Y1 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtl3Q6P1Y1 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rtl3Q6P1Y1 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rtl3Q6P1Y1 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtl3Q6P1Y1 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtl3Q6P1Y1 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtl3Q6P1Y1 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.17■□□□□ 0.02
Rtl3Q6P1Y1 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.17■□□□□ 0.02
Rtl3Q6P1Y1 Gm13464-201ENSMUST00000119418 935 ntBASIC15.17■□□□□ 0.02
Rtl3Q6P1Y1 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rtl3Q6P1Y1 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.17■□□□□ 0.02
Rtl3Q6P1Y1 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rtl3Q6P1Y1 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.17■□□□□ 0.02
Rtl3Q6P1Y1 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.17■□□□□ 0.02
Rtl3Q6P1Y1 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.17■□□□□ 0.02
Rtl3Q6P1Y1 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.17■□□□□ 0.02
Rtl3Q6P1Y1 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rtl3Q6P1Y1 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.17■□□□□ 0.02
Rtl3Q6P1Y1 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC15.17■□□□□ 0.02
Rtl3Q6P1Y1 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.17■□□□□ 0.02
Rtl3Q6P1Y1 Efs-202ENSMUST00000227037 2540 ntBASIC15.17■□□□□ 0.02
Rtl3Q6P1Y1 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtl3Q6P1Y1 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtl3Q6P1Y1 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtl3Q6P1Y1 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtl3Q6P1Y1 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtl3Q6P1Y1 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rtl3Q6P1Y1 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rtl3Q6P1Y1 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Rtl3Q6P1Y1 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtl3Q6P1Y1 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rtl3Q6P1Y1 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rtl3Q6P1Y1 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtl3Q6P1Y1 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.16■□□□□ 0.02
Rtl3Q6P1Y1 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtl3Q6P1Y1 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtl3Q6P1Y1 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtl3Q6P1Y1 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtl3Q6P1Y1 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Rtl3Q6P1Y1 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.16■□□□□ 0.02
Rtl3Q6P1Y1 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtl3Q6P1Y1 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.16■□□□□ 0.02
Rtl3Q6P1Y1 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rtl3Q6P1Y1 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.16■□□□□ 0.02
Rtl3Q6P1Y1 Gm11543-201ENSMUST00000120758 370 ntBASIC15.16■□□□□ 0.02
Rtl3Q6P1Y1 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms