Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Gm44771-201ENSMUST00000206975 626 ntBASIC16.44■□□□□ 0.22
Hdac4Q6NZM9 AW822252-206ENSMUST00000208904 237 ntBASIC16.44■□□□□ 0.22
Hdac4Q6NZM9 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac4Q6NZM9 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac4Q6NZM9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Hdac4Q6NZM9 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac4Q6NZM9 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac4Q6NZM9 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Hdac4Q6NZM9 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac4Q6NZM9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.44■□□□□ 0.22
Hdac4Q6NZM9 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac4Q6NZM9 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac4Q6NZM9 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac4Q6NZM9 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac4Q6NZM9 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac4Q6NZM9 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac4Q6NZM9 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac4Q6NZM9 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.43■□□□□ 0.22
Hdac4Q6NZM9 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac4Q6NZM9 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.43■□□□□ 0.22
Hdac4Q6NZM9 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac4Q6NZM9 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Hdac4Q6NZM9 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac4Q6NZM9 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.43■□□□□ 0.22
Hdac4Q6NZM9 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac4Q6NZM9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Hdac4Q6NZM9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Hdac4Q6NZM9 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Hdac4Q6NZM9 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac4Q6NZM9 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Hdac4Q6NZM9 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.43■□□□□ 0.22
Hdac4Q6NZM9 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.43■□□□□ 0.22
Hdac4Q6NZM9 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac4Q6NZM9 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac4Q6NZM9 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac4Q6NZM9 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac4Q6NZM9 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Hdac4Q6NZM9 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac4Q6NZM9 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac4Q6NZM9 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Hdac4Q6NZM9 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Hdac4Q6NZM9 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac4Q6NZM9 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac4Q6NZM9 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac4Q6NZM9 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac4Q6NZM9 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.43■□□□□ 0.22
Hdac4Q6NZM9 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac4Q6NZM9 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.43■□□□□ 0.22
Hdac4Q6NZM9 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac4Q6NZM9 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.42■□□□□ 0.22
Hdac4Q6NZM9 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac4Q6NZM9 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac4Q6NZM9 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac4Q6NZM9 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac4Q6NZM9 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac4Q6NZM9 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac4Q6NZM9 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac4Q6NZM9 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Hdac4Q6NZM9 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Hdac4Q6NZM9 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.42■□□□□ 0.22
Hdac4Q6NZM9 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac4Q6NZM9 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac4Q6NZM9 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac4Q6NZM9 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac4Q6NZM9 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac4Q6NZM9 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Hdac4Q6NZM9 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Hdac4Q6NZM9 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.42■□□□□ 0.22
Hdac4Q6NZM9 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.42■□□□□ 0.22
Hdac4Q6NZM9 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.42■□□□□ 0.22
Hdac4Q6NZM9 Gm15483-201ENSMUST00000120338 456 ntBASIC16.42■□□□□ 0.22
Hdac4Q6NZM9 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.42■□□□□ 0.22
Hdac4Q6NZM9 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac4Q6NZM9 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.42■□□□□ 0.22
Hdac4Q6NZM9 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.42■□□□□ 0.22
Hdac4Q6NZM9 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac4Q6NZM9 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Hdac4Q6NZM9 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac4Q6NZM9 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac4Q6NZM9 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac4Q6NZM9 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac4Q6NZM9 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Hdac4Q6NZM9 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Hdac4Q6NZM9 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Hdac4Q6NZM9 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac4Q6NZM9 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac4Q6NZM9 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac4Q6NZM9 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac4Q6NZM9 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac4Q6NZM9 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.41■□□□□ 0.22
Hdac4Q6NZM9 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac4Q6NZM9 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac4Q6NZM9 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Hdac4Q6NZM9 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac4Q6NZM9 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.41■□□□□ 0.22
Hdac4Q6NZM9 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac4Q6NZM9 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.41■□□□□ 0.22
Hdac4Q6NZM9 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac4Q6NZM9 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Hdac4Q6NZM9 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms