Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Krt40Q6IFX3 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Krt40Q6IFX3 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Krt40Q6IFX3 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC17.24■□□□□ 0.35
Krt40Q6IFX3 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Krt40Q6IFX3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Krt40Q6IFX3 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Krt40Q6IFX3 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Krt40Q6IFX3 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Krt40Q6IFX3 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Krt40Q6IFX3 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Krt40Q6IFX3 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Krt40Q6IFX3 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Krt40Q6IFX3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Krt40Q6IFX3 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Krt40Q6IFX3 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Krt40Q6IFX3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Krt40Q6IFX3 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.23■□□□□ 0.35
Krt40Q6IFX3 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Krt40Q6IFX3 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Krt40Q6IFX3 Mir6977-201ENSMUST00000184960 64 ntBASIC17.23■□□□□ 0.35
Krt40Q6IFX3 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Krt40Q6IFX3 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Krt40Q6IFX3 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Krt40Q6IFX3 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Krt40Q6IFX3 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Krt40Q6IFX3 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Krt40Q6IFX3 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Krt40Q6IFX3 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Krt40Q6IFX3 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Krt40Q6IFX3 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Krt40Q6IFX3 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Krt40Q6IFX3 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Krt40Q6IFX3 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Krt40Q6IFX3 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Krt40Q6IFX3 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Krt40Q6IFX3 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Krt40Q6IFX3 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Krt40Q6IFX3 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Krt40Q6IFX3 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Krt40Q6IFX3 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Krt40Q6IFX3 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Krt40Q6IFX3 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Krt40Q6IFX3 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Krt40Q6IFX3 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Krt40Q6IFX3 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Krt40Q6IFX3 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Krt40Q6IFX3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Krt40Q6IFX3 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Krt40Q6IFX3 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Krt40Q6IFX3 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC17.22■□□□□ 0.35
Krt40Q6IFX3 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Krt40Q6IFX3 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Krt40Q6IFX3 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC17.22■□□□□ 0.35
Krt40Q6IFX3 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Krt40Q6IFX3 Gm27437-201ENSMUST00000183429 107 ntBASIC17.22■□□□□ 0.35
Krt40Q6IFX3 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.22■□□□□ 0.35
Krt40Q6IFX3 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Krt40Q6IFX3 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Krt40Q6IFX3 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Krt40Q6IFX3 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Krt40Q6IFX3 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Krt40Q6IFX3 Gm13127-201ENSMUST00000118978 1389 ntBASIC17.22■□□□□ 0.35
Krt40Q6IFX3 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Krt40Q6IFX3 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Krt40Q6IFX3 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Krt40Q6IFX3 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Krt40Q6IFX3 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Krt40Q6IFX3 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Krt40Q6IFX3 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Krt40Q6IFX3 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Krt40Q6IFX3 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Krt40Q6IFX3 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Krt40Q6IFX3 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.21■□□□□ 0.35
Krt40Q6IFX3 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Krt40Q6IFX3 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Krt40Q6IFX3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Krt40Q6IFX3 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Krt40Q6IFX3 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Krt40Q6IFX3 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Krt40Q6IFX3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Krt40Q6IFX3 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Krt40Q6IFX3 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Krt40Q6IFX3 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC17.21■□□□□ 0.35
Krt40Q6IFX3 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC17.21■□□□□ 0.35
Krt40Q6IFX3 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC17.21■□□□□ 0.35
Krt40Q6IFX3 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC17.21■□□□□ 0.35
Krt40Q6IFX3 Gm15487-201ENSMUST00000122373 465 ntBASIC17.21■□□□□ 0.35
Krt40Q6IFX3 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC17.21■□□□□ 0.35
Krt40Q6IFX3 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC17.21■□□□□ 0.35
Krt40Q6IFX3 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Krt40Q6IFX3 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Krt40Q6IFX3 AA619741-201ENSMUST00000195095 646 ntBASIC17.21■□□□□ 0.35
Krt40Q6IFX3 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Krt40Q6IFX3 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.21■□□□□ 0.35
Krt40Q6IFX3 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC17.21■□□□□ 0.35
Krt40Q6IFX3 Gm46209-201ENSMUST00000217912 553 ntBASIC17.21■□□□□ 0.35
Krt40Q6IFX3 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Krt40Q6IFX3 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Krt40Q6IFX3 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms