Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
VcanQ62059 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VcanQ62059 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VcanQ62059 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
VcanQ62059 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.57□□□□□ -0.24
VcanQ62059 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
VcanQ62059 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VcanQ62059 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.57□□□□□ -0.24
VcanQ62059 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VcanQ62059 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VcanQ62059 Mir6979-201ENSMUST00000183927 56 ntBASIC13.57□□□□□ -0.24
VcanQ62059 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.57□□□□□ -0.24
VcanQ62059 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VcanQ62059 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
VcanQ62059 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VcanQ62059 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VcanQ62059 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VcanQ62059 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.56□□□□□ -0.24
VcanQ62059 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VcanQ62059 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC13.56□□□□□ -0.24
VcanQ62059 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC13.56□□□□□ -0.24
VcanQ62059 Gm27486-201ENSMUST00000184923 80 ntBASIC13.56□□□□□ -0.24
VcanQ62059 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VcanQ62059 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.56□□□□□ -0.24
VcanQ62059 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VcanQ62059 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VcanQ62059 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VcanQ62059 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
VcanQ62059 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VcanQ62059 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VcanQ62059 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.56□□□□□ -0.24
VcanQ62059 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VcanQ62059 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
VcanQ62059 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VcanQ62059 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VcanQ62059 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VcanQ62059 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VcanQ62059 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
VcanQ62059 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.56□□□□□ -0.24
VcanQ62059 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
VcanQ62059 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VcanQ62059 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
VcanQ62059 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.55□□□□□ -0.24
VcanQ62059 Mir125a-201ENSMUST00000083545 68 ntBASIC13.55□□□□□ -0.24
VcanQ62059 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
VcanQ62059 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VcanQ62059 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VcanQ62059 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VcanQ62059 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VcanQ62059 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VcanQ62059 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VcanQ62059 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VcanQ62059 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VcanQ62059 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VcanQ62059 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VcanQ62059 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
VcanQ62059 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VcanQ62059 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.55□□□□□ -0.24
VcanQ62059 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
VcanQ62059 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VcanQ62059 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VcanQ62059 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VcanQ62059 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.55□□□□□ -0.24
VcanQ62059 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
VcanQ62059 Gm11793-201ENSMUST00000120433 981 ntBASIC13.55□□□□□ -0.24
VcanQ62059 Gm6222-201ENSMUST00000120787 396 ntBASIC13.55□□□□□ -0.24
VcanQ62059 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VcanQ62059 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VcanQ62059 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC13.55□□□□□ -0.24
VcanQ62059 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VcanQ62059 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VcanQ62059 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VcanQ62059 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VcanQ62059 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.54□□□□□ -0.24
VcanQ62059 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VcanQ62059 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VcanQ62059 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.54□□□□□ -0.24
VcanQ62059 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VcanQ62059 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.54□□□□□ -0.24
VcanQ62059 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.54□□□□□ -0.24
VcanQ62059 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
VcanQ62059 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VcanQ62059 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
VcanQ62059 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VcanQ62059 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.54□□□□□ -0.24
VcanQ62059 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VcanQ62059 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VcanQ62059 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VcanQ62059 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VcanQ62059 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VcanQ62059 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
VcanQ62059 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.54□□□□□ -0.24
VcanQ62059 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VcanQ62059 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VcanQ62059 Gm12928-201ENSMUST00000117115 573 ntBASIC13.54□□□□□ -0.24
VcanQ62059 Gm27331-201ENSMUST00000183705 60 ntBASIC13.54□□□□□ -0.24
VcanQ62059 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VcanQ62059 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
VcanQ62059 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VcanQ62059 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms