Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Clcn4Q61418 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Clcn4Q61418 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clcn4Q61418 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Clcn4Q61418 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clcn4Q61418 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Clcn4Q61418 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.56□□□□□ -0.24
Clcn4Q61418 Gm7787-201ENSMUST00000216858 688 ntBASIC13.56□□□□□ -0.24
Clcn4Q61418 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clcn4Q61418 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clcn4Q61418 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.56□□□□□ -0.24
Clcn4Q61418 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clcn4Q61418 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clcn4Q61418 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clcn4Q61418 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clcn4Q61418 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clcn4Q61418 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clcn4Q61418 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clcn4Q61418 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.56□□□□□ -0.24
Clcn4Q61418 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clcn4Q61418 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Clcn4Q61418 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clcn4Q61418 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clcn4Q61418 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Clcn4Q61418 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clcn4Q61418 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Clcn4Q61418 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcn4Q61418 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcn4Q61418 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcn4Q61418 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Clcn4Q61418 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcn4Q61418 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.55□□□□□ -0.24
Clcn4Q61418 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcn4Q61418 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcn4Q61418 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcn4Q61418 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Clcn4Q61418 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.55□□□□□ -0.24
Clcn4Q61418 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Clcn4Q61418 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.55□□□□□ -0.24
Clcn4Q61418 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcn4Q61418 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.55□□□□□ -0.24
Clcn4Q61418 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcn4Q61418 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Clcn4Q61418 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.55□□□□□ -0.24
Clcn4Q61418 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Clcn4Q61418 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Clcn4Q61418 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Clcn4Q61418 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcn4Q61418 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Clcn4Q61418 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Clcn4Q61418 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcn4Q61418 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcn4Q61418 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcn4Q61418 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Clcn4Q61418 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Clcn4Q61418 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Clcn4Q61418 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcn4Q61418 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Clcn4Q61418 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn4Q61418 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.54□□□□□ -0.24
Clcn4Q61418 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn4Q61418 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.54□□□□□ -0.24
Clcn4Q61418 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Clcn4Q61418 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.54□□□□□ -0.24
Clcn4Q61418 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn4Q61418 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn4Q61418 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Clcn4Q61418 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn4Q61418 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn4Q61418 Celf4-206ENSMUST00000224553 1729 ntBASIC13.54□□□□□ -0.24
Clcn4Q61418 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Clcn4Q61418 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn4Q61418 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Clcn4Q61418 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn4Q61418 Gm11764-201ENSMUST00000120221 623 ntBASIC13.54□□□□□ -0.24
Clcn4Q61418 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn4Q61418 Gm6736-201ENSMUST00000166583 948 ntBASIC13.54□□□□□ -0.24
Clcn4Q61418 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.54□□□□□ -0.24
Clcn4Q61418 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.54□□□□□ -0.24
Clcn4Q61418 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.54□□□□□ -0.24
Clcn4Q61418 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.54□□□□□ -0.24
Clcn4Q61418 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.54□□□□□ -0.24
Clcn4Q61418 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn4Q61418 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn4Q61418 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Clcn4Q61418 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn4Q61418 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Clcn4Q61418 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn4Q61418 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn4Q61418 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn4Q61418 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn4Q61418 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn4Q61418 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn4Q61418 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn4Q61418 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn4Q61418 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcn4Q61418 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Clcn4Q61418 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.54□□□□□ -0.24
Clcn4Q61418 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Clcn4Q61418 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms