Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfaip3Q60769 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfaip3Q60769 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Tnfaip3Q60769 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfaip3Q60769 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfaip3Q60769 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfaip3Q60769 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Tnfaip3Q60769 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Tnfaip3Q60769 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.83□□□□□ -0.2
Tnfaip3Q60769 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Tnfaip3Q60769 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfaip3Q60769 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Tnfaip3Q60769 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.83□□□□□ -0.2
Tnfaip3Q60769 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.83□□□□□ -0.2
Tnfaip3Q60769 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.83□□□□□ -0.2
Tnfaip3Q60769 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.83□□□□□ -0.2
Tnfaip3Q60769 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfaip3Q60769 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.83□□□□□ -0.2
Tnfaip3Q60769 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.83□□□□□ -0.2
Tnfaip3Q60769 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Tnfaip3Q60769 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Tnfaip3Q60769 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Tnfaip3Q60769 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfaip3Q60769 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Tnfaip3Q60769 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.83□□□□□ -0.2
Tnfaip3Q60769 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tnfaip3Q60769 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.83□□□□□ -0.2
Tnfaip3Q60769 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfaip3Q60769 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfaip3Q60769 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfaip3Q60769 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.82□□□□□ -0.2
Tnfaip3Q60769 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfaip3Q60769 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfaip3Q60769 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfaip3Q60769 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfaip3Q60769 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfaip3Q60769 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfaip3Q60769 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfaip3Q60769 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfaip3Q60769 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.82□□□□□ -0.2
Tnfaip3Q60769 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfaip3Q60769 Gm27920-201ENSMUST00000183953 96 ntBASIC13.82□□□□□ -0.2
Tnfaip3Q60769 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfaip3Q60769 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfaip3Q60769 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfaip3Q60769 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfaip3Q60769 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfaip3Q60769 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfaip3Q60769 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfaip3Q60769 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfaip3Q60769 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfaip3Q60769 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfaip3Q60769 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfaip3Q60769 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfaip3Q60769 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfaip3Q60769 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfaip3Q60769 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Gm22065-201ENSMUST00000103753 110 ntBASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Gm22066-201ENSMUST00000103761 110 ntBASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Gm24932-201ENSMUST00000103763 110 ntBASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Gm24115-201ENSMUST00000103799 110 ntBASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Gm22190-201ENSMUST00000103827 110 ntBASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Gm22191-201ENSMUST00000103831 110 ntBASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Gm24721-201ENSMUST00000103849 110 ntBASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Gm28018-201ENSMUST00000103869 110 ntBASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Gm26399-201ENSMUST00000103937 110 ntBASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Gm25349-201ENSMUST00000177728 110 ntBASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Gm23616-201ENSMUST00000177797 110 ntBASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Gm25871-201ENSMUST00000177816 110 ntBASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Gm24752-201ENSMUST00000178240 110 ntBASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Gm24496-201ENSMUST00000178287 110 ntBASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Gm25649-201ENSMUST00000178476 110 ntBASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Gm25548-201ENSMUST00000178681 110 ntBASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Gm23147-201ENSMUST00000178841 110 ntBASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Gm26095-201ENSMUST00000179270 110 ntBASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Gm22171-201ENSMUST00000179283 110 ntBASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Gm23936-201ENSMUST00000179354 110 ntBASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Gm22619-201ENSMUST00000179516 110 ntBASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Gm25255-201ENSMUST00000179579 110 ntBASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Gm24755-201ENSMUST00000179691 110 ntBASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Gm26506-201ENSMUST00000179692 110 ntBASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Gm25086-201ENSMUST00000179931 110 ntBASIC13.81□□□□□ -0.2
Tnfaip3Q60769 Gm23243-201ENSMUST00000180047 110 ntBASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms