Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Scaf1Q5U4C3 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Scaf1Q5U4C3 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Scaf1Q5U4C3 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC19.08■□□□□ 0.64
Scaf1Q5U4C3 Gm13034-201ENSMUST00000121342 3177 ntBASIC19.08■□□□□ 0.64
Scaf1Q5U4C3 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC19.08■□□□□ 0.64
Scaf1Q5U4C3 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Scaf1Q5U4C3 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
Scaf1Q5U4C3 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Scaf1Q5U4C3 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Scaf1Q5U4C3 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Scaf1Q5U4C3 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Scaf1Q5U4C3 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Scaf1Q5U4C3 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scaf1Q5U4C3 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scaf1Q5U4C3 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scaf1Q5U4C3 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
Scaf1Q5U4C3 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Scaf1Q5U4C3 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scaf1Q5U4C3 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC19.07■□□□□ 0.64
Scaf1Q5U4C3 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Scaf1Q5U4C3 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC19.07■□□□□ 0.64
Scaf1Q5U4C3 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC19.07■□□□□ 0.64
Scaf1Q5U4C3 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC19.07■□□□□ 0.64
Scaf1Q5U4C3 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scaf1Q5U4C3 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Scaf1Q5U4C3 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC19.07■□□□□ 0.64
Scaf1Q5U4C3 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
Scaf1Q5U4C3 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scaf1Q5U4C3 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Scaf1Q5U4C3 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scaf1Q5U4C3 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scaf1Q5U4C3 BC037039-201ENSMUST00000192003 2205 ntBASIC19.06■□□□□ 0.64
Scaf1Q5U4C3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
Scaf1Q5U4C3 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scaf1Q5U4C3 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scaf1Q5U4C3 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Scaf1Q5U4C3 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Scaf1Q5U4C3 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scaf1Q5U4C3 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scaf1Q5U4C3 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Scaf1Q5U4C3 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Scaf1Q5U4C3 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC19.06■□□□□ 0.64
Scaf1Q5U4C3 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC19.06■□□□□ 0.64
Scaf1Q5U4C3 Gm21470-201ENSMUST00000187680 696 ntBASIC19.06■□□□□ 0.64
Scaf1Q5U4C3 Gm37748-201ENSMUST00000194379 1140 ntBASIC19.06■□□□□ 0.64
Scaf1Q5U4C3 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scaf1Q5U4C3 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC19.06■□□□□ 0.64
Scaf1Q5U4C3 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scaf1Q5U4C3 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC19.06■□□□□ 0.64
Scaf1Q5U4C3 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scaf1Q5U4C3 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Scaf1Q5U4C3 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Scaf1Q5U4C3 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scaf1Q5U4C3 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Scaf1Q5U4C3 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.06■□□□□ 0.64
Scaf1Q5U4C3 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Scaf1Q5U4C3 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Scaf1Q5U4C3 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.05■□□□□ 0.64
Scaf1Q5U4C3 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Scaf1Q5U4C3 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scaf1Q5U4C3 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC19.05■□□□□ 0.64
Scaf1Q5U4C3 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Scaf1Q5U4C3 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scaf1Q5U4C3 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scaf1Q5U4C3 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Scaf1Q5U4C3 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Scaf1Q5U4C3 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Scaf1Q5U4C3 Gm18187-201ENSMUST00000196476 984 ntBASIC19.05■□□□□ 0.64
Scaf1Q5U4C3 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scaf1Q5U4C3 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scaf1Q5U4C3 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Scaf1Q5U4C3 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC19.05■□□□□ 0.64
Scaf1Q5U4C3 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scaf1Q5U4C3 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scaf1Q5U4C3 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Scaf1Q5U4C3 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scaf1Q5U4C3 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scaf1Q5U4C3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scaf1Q5U4C3 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Scaf1Q5U4C3 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scaf1Q5U4C3 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scaf1Q5U4C3 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scaf1Q5U4C3 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scaf1Q5U4C3 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scaf1Q5U4C3 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scaf1Q5U4C3 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scaf1Q5U4C3 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scaf1Q5U4C3 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scaf1Q5U4C3 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scaf1Q5U4C3 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scaf1Q5U4C3 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Scaf1Q5U4C3 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC19.04■□□□□ 0.64
Scaf1Q5U4C3 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
Scaf1Q5U4C3 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Scaf1Q5U4C3 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Scaf1Q5U4C3 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Scaf1Q5U4C3 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC19.04■□□□□ 0.64
Scaf1Q5U4C3 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC19.04■□□□□ 0.64
Scaf1Q5U4C3 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms