Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Gm5639-201ENSMUST00000122305 2403 ntBASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 Gm26684-202ENSMUST00000228229 8257 ntBASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 AC124549.3-201ENSMUST00000225541 367 ntBASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-1Q5R1I8 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Gm14464-201ENSMUST00000119658 1254 ntBASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Gm9847-201ENSMUST00000052528 599 ntBASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms