Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Gm8258-201ENSMUST00000055593 1449 ntBASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Gm10499-201ENSMUST00000174094 934 ntBASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Gm11453-201ENSMUST00000117318 1007 ntBASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Gm29518-201ENSMUST00000190858 372 ntBASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms