Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Gli1P47806 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.37□□□□□ -0.11
Gli1P47806 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gli1P47806 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Gli1P47806 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gli1P47806 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gli1P47806 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gli1P47806 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Gli1P47806 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gli1P47806 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gli1P47806 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.37□□□□□ -0.11
Gli1P47806 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gli1P47806 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Gli1P47806 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gli1P47806 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gli1P47806 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gli1P47806 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gli1P47806 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gli1P47806 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gli1P47806 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gli1P47806 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gli1P47806 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gli1P47806 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gli1P47806 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gli1P47806 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Gli1P47806 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gli1P47806 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Gli1P47806 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gli1P47806 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Gli1P47806 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gli1P47806 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.36□□□□□ -0.11
Gli1P47806 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gli1P47806 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Gli1P47806 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gli1P47806 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gli1P47806 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Gli1P47806 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.36□□□□□ -0.11
Gli1P47806 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gli1P47806 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.36□□□□□ -0.11
Gli1P47806 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.36□□□□□ -0.11
Gli1P47806 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.36□□□□□ -0.11
Gli1P47806 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gli1P47806 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Gli1P47806 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.36□□□□□ -0.11
Gli1P47806 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gli1P47806 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gli1P47806 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Gli1P47806 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gli1P47806 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gli1P47806 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gli1P47806 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gli1P47806 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gli1P47806 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gli1P47806 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gli1P47806 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.35□□□□□ -0.11
Gli1P47806 Celf4-206ENSMUST00000224553 1729 ntBASIC14.35□□□□□ -0.11
Gli1P47806 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gli1P47806 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.35□□□□□ -0.11
Gli1P47806 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gli1P47806 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Gli1P47806 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.35□□□□□ -0.11
Gli1P47806 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gli1P47806 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gli1P47806 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gli1P47806 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gli1P47806 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Gli1P47806 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Gli1P47806 Gm8344-201ENSMUST00000119813 856 ntBASIC14.35□□□□□ -0.11
Gli1P47806 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.35□□□□□ -0.11
Gli1P47806 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.35□□□□□ -0.11
Gli1P47806 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gli1P47806 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.35□□□□□ -0.11
Gli1P47806 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Gli1P47806 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.35□□□□□ -0.11
Gli1P47806 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.35□□□□□ -0.11
Gli1P47806 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gli1P47806 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Gli1P47806 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gli1P47806 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gli1P47806 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gli1P47806 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gli1P47806 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gli1P47806 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gli1P47806 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gli1P47806 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gli1P47806 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gli1P47806 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gli1P47806 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gli1P47806 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gli1P47806 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gli1P47806 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gli1P47806 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Gli1P47806 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Gli1P47806 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Gli1P47806 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gli1P47806 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.34□□□□□ -0.11
Gli1P47806 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gli1P47806 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.34□□□□□ -0.11
Gli1P47806 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gli1P47806 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms