Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox18P43680 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox18P43680 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sox18P43680 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sox18P43680 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Sox18P43680 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sox18P43680 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox18P43680 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox18P43680 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox18P43680 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox18P43680 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox18P43680 Gm11425-201ENSMUST00000119608 498 ntBASIC14.08□□□□□ -0.16
Sox18P43680 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Sox18P43680 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Sox18P43680 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox18P43680 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Sox18P43680 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Sox18P43680 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox18P43680 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox18P43680 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Sox18P43680 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.08□□□□□ -0.16
Sox18P43680 Gm43703-201ENSMUST00000200523 763 ntBASIC14.08□□□□□ -0.16
Sox18P43680 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.08□□□□□ -0.16
Sox18P43680 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.08□□□□□ -0.16
Sox18P43680 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.08□□□□□ -0.16
Sox18P43680 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox18P43680 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox18P43680 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox18P43680 Gm9396-201ENSMUST00000076703 567 ntBASIC14.08□□□□□ -0.16
Sox18P43680 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.08□□□□□ -0.16
Sox18P43680 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox18P43680 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox18P43680 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Sox18P43680 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Sox18P43680 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox18P43680 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox18P43680 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.08□□□□□ -0.16
Sox18P43680 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox18P43680 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox18P43680 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox18P43680 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox18P43680 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.07□□□□□ -0.16
Sox18P43680 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Sox18P43680 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sox18P43680 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox18P43680 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox18P43680 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox18P43680 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.07□□□□□ -0.16
Sox18P43680 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.07□□□□□ -0.16
Sox18P43680 Gm18624-201ENSMUST00000220966 658 ntBASIC14.07□□□□□ -0.16
Sox18P43680 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox18P43680 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox18P43680 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox18P43680 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Sox18P43680 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox18P43680 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.07□□□□□ -0.16
Sox18P43680 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox18P43680 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox18P43680 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox18P43680 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Sox18P43680 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox18P43680 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox18P43680 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox18P43680 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox18P43680 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.06□□□□□ -0.16
Sox18P43680 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Sox18P43680 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Sox18P43680 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sox18P43680 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.06□□□□□ -0.16
Sox18P43680 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.06□□□□□ -0.16
Sox18P43680 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.06□□□□□ -0.16
Sox18P43680 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Sox18P43680 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sox18P43680 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Sox18P43680 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Sox18P43680 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.06□□□□□ -0.16
Sox18P43680 Gm45331-201ENSMUST00000209868 554 ntBASIC14.06□□□□□ -0.16
Sox18P43680 Gm46209-201ENSMUST00000217912 553 ntBASIC14.06□□□□□ -0.16
Sox18P43680 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.06□□□□□ -0.16
Sox18P43680 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox18P43680 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox18P43680 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.06□□□□□ -0.16
Sox18P43680 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sox18P43680 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox18P43680 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox18P43680 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox18P43680 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox18P43680 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox18P43680 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Sox18P43680 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox18P43680 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Sox18P43680 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Sox18P43680 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox18P43680 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox18P43680 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox18P43680 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox18P43680 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox18P43680 Gm9002-201ENSMUST00000178437 499 ntBASIC14.05□□□□□ -0.16
Sox18P43680 Gm3436-201ENSMUST00000179930 840 ntBASIC14.05□□□□□ -0.16
Sox18P43680 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms