Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp9P41245 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.37□□□□□ -0.43
Mmp9P41245 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp9P41245 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp9P41245 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.37□□□□□ -0.43
Mmp9P41245 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp9P41245 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp9P41245 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Mmp9P41245 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Mmp9P41245 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Mmp9P41245 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Mmp9P41245 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp9P41245 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp9P41245 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp9P41245 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp9P41245 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp9P41245 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp9P41245 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp9P41245 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Mmp9P41245 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.36□□□□□ -0.43
Mmp9P41245 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp9P41245 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Mmp9P41245 Gm25406-201ENSMUST00000157599 105 ntBASIC12.36□□□□□ -0.43
Mmp9P41245 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.36□□□□□ -0.43
Mmp9P41245 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.36□□□□□ -0.43
Mmp9P41245 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp9P41245 Gm5864-201ENSMUST00000202263 970 ntBASIC12.36□□□□□ -0.43
Mmp9P41245 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp9P41245 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp9P41245 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp9P41245 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Mmp9P41245 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.36□□□□□ -0.43
Mmp9P41245 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp9P41245 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.36□□□□□ -0.43
Mmp9P41245 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp9P41245 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp9P41245 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp9P41245 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp9P41245 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp9P41245 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp9P41245 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp9P41245 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp9P41245 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Mmp9P41245 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Mmp9P41245 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Mmp9P41245 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Mmp9P41245 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Mmp9P41245 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Mmp9P41245 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Mmp9P41245 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Mmp9P41245 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Mmp9P41245 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.35□□□□□ -0.43
Mmp9P41245 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Mmp9P41245 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Mmp9P41245 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Mmp9P41245 Mir8098-201ENSMUST00000184011 137 ntBASIC12.35□□□□□ -0.43
Mmp9P41245 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.35□□□□□ -0.43
Mmp9P41245 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Mmp9P41245 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Mmp9P41245 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Mmp9P41245 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Mmp9P41245 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.35□□□□□ -0.43
Mmp9P41245 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.35□□□□□ -0.43
Mmp9P41245 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Mmp9P41245 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Mmp9P41245 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Mmp9P41245 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Mmp9P41245 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Mmp9P41245 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Mmp9P41245 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Mmp9P41245 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Mmp9P41245 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Mmp9P41245 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Mmp9P41245 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Mmp9P41245 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Mmp9P41245 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Mmp9P41245 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Mmp9P41245 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Mmp9P41245 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Mmp9P41245 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Mmp9P41245 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Mmp9P41245 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.34□□□□□ -0.43
Mmp9P41245 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.34□□□□□ -0.43
Mmp9P41245 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Mmp9P41245 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Mmp9P41245 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Mmp9P41245 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Mmp9P41245 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Mmp9P41245 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.34□□□□□ -0.43
Mmp9P41245 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Mmp9P41245 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Mmp9P41245 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Mmp9P41245 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Mmp9P41245 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Mmp9P41245 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Mmp9P41245 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Mmp9P41245 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Mmp9P41245 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Mmp9P41245 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Mmp9P41245 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms