Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.83□□□□□ -0.2
Sox6P40645 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox6P40645 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox6P40645 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox6P40645 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.83□□□□□ -0.2
Sox6P40645 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox6P40645 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox6P40645 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox6P40645 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox6P40645 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox6P40645 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox6P40645 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox6P40645 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sox6P40645 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox6P40645 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Sox6P40645 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Sox6P40645 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox6P40645 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sox6P40645 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.82□□□□□ -0.2
Sox6P40645 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox6P40645 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Sox6P40645 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox6P40645 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox6P40645 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Sox6P40645 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sox6P40645 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.82□□□□□ -0.2
Sox6P40645 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.82□□□□□ -0.2
Sox6P40645 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.82□□□□□ -0.2
Sox6P40645 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Sox6P40645 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.82□□□□□ -0.2
Sox6P40645 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sox6P40645 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Sox6P40645 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sox6P40645 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox6P40645 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox6P40645 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox6P40645 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Sox6P40645 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sox6P40645 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox6P40645 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox6P40645 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox6P40645 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox6P40645 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sox6P40645 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox6P40645 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox6P40645 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sox6P40645 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox6P40645 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.81□□□□□ -0.2
Sox6P40645 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox6P40645 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.81□□□□□ -0.2
Sox6P40645 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox6P40645 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox6P40645 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sox6P40645 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox6P40645 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox6P40645 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Sox6P40645 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sox6P40645 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox6P40645 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox6P40645 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Sox6P40645 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sox6P40645 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.81□□□□□ -0.2
Sox6P40645 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox6P40645 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox6P40645 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox6P40645 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox6P40645 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox6P40645 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox6P40645 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sox6P40645 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Sox6P40645 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.81□□□□□ -0.2
Sox6P40645 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sox6P40645 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.81□□□□□ -0.2
Sox6P40645 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox6P40645 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox6P40645 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sox6P40645 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox6P40645 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
Sox6P40645 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Sox6P40645 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox6P40645 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sox6P40645 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox6P40645 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox6P40645 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox6P40645 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox6P40645 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox6P40645 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sox6P40645 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox6P40645 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox6P40645 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.8□□□□□ -0.2
Sox6P40645 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox6P40645 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Sox6P40645 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox6P40645 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox6P40645 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox6P40645 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox6P40645 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox6P40645 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox6P40645 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox6P40645 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms