Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RetP35546 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
RetP35546 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RetP35546 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RetP35546 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RetP35546 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.78□□□□□ -0.2
RetP35546 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
RetP35546 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RetP35546 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RetP35546 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.78□□□□□ -0.2
RetP35546 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RetP35546 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RetP35546 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
RetP35546 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RetP35546 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
RetP35546 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
RetP35546 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
RetP35546 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RetP35546 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.77□□□□□ -0.21
RetP35546 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.77□□□□□ -0.21
RetP35546 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RetP35546 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
RetP35546 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
RetP35546 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.77□□□□□ -0.21
RetP35546 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RetP35546 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RetP35546 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RetP35546 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
RetP35546 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RetP35546 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RetP35546 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RetP35546 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
RetP35546 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RetP35546 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
RetP35546 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RetP35546 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RetP35546 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.76□□□□□ -0.21
RetP35546 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RetP35546 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RetP35546 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RetP35546 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.76□□□□□ -0.21
RetP35546 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RetP35546 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.76□□□□□ -0.21
RetP35546 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RetP35546 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RetP35546 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RetP35546 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RetP35546 Gm12134-201ENSMUST00000122109 520 ntBASIC13.76□□□□□ -0.21
RetP35546 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RetP35546 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.76□□□□□ -0.21
RetP35546 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.76□□□□□ -0.21
RetP35546 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.76□□□□□ -0.21
RetP35546 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.76□□□□□ -0.21
RetP35546 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.76□□□□□ -0.21
RetP35546 Gm43474-201ENSMUST00000196415 774 ntBASIC13.76□□□□□ -0.21
RetP35546 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.76□□□□□ -0.21
RetP35546 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RetP35546 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
RetP35546 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RetP35546 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RetP35546 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RetP35546 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.76□□□□□ -0.21
RetP35546 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RetP35546 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RetP35546 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
RetP35546 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RetP35546 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RetP35546 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.75□□□□□ -0.21
RetP35546 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RetP35546 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.75□□□□□ -0.21
RetP35546 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RetP35546 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RetP35546 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.75□□□□□ -0.21
RetP35546 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
RetP35546 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RetP35546 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RetP35546 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RetP35546 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
RetP35546 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
RetP35546 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
RetP35546 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RetP35546 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RetP35546 Gm43767-201ENSMUST00000198933 381 ntBASIC13.75□□□□□ -0.21
RetP35546 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.75□□□□□ -0.21
RetP35546 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
RetP35546 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RetP35546 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.75□□□□□ -0.21
RetP35546 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.75□□□□□ -0.21
RetP35546 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.75□□□□□ -0.21
RetP35546 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
RetP35546 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RetP35546 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RetP35546 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RetP35546 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RetP35546 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RetP35546 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RetP35546 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RetP35546 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
RetP35546 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RetP35546 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms