Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.26□□□□□ -0.13
Hoxc11P31313 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc11P31313 Gm6973-201ENSMUST00000117080 721 ntBASIC14.26□□□□□ -0.13
Hoxc11P31313 Gm14057-201ENSMUST00000120631 482 ntBASIC14.26□□□□□ -0.13
Hoxc11P31313 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc11P31313 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc11P31313 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc11P31313 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
Hoxc11P31313 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.26□□□□□ -0.13
Hoxc11P31313 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.26□□□□□ -0.13
Hoxc11P31313 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc11P31313 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc11P31313 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Hoxc11P31313 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc11P31313 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc11P31313 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc11P31313 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc11P31313 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc11P31313 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc11P31313 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc11P31313 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc11P31313 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc11P31313 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.25□□□□□ -0.13
Hoxc11P31313 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc11P31313 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
Hoxc11P31313 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.25□□□□□ -0.13
Hoxc11P31313 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc11P31313 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Hoxc11P31313 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc11P31313 Gm24158-201ENSMUST00000175263 71 ntBASIC14.25□□□□□ -0.13
Hoxc11P31313 Gm7063-201ENSMUST00000186840 981 ntBASIC14.25□□□□□ -0.13
Hoxc11P31313 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc11P31313 Gm7774-201ENSMUST00000200064 533 ntBASIC14.25□□□□□ -0.13
Hoxc11P31313 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.25□□□□□ -0.13
Hoxc11P31313 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc11P31313 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.25□□□□□ -0.13
Hoxc11P31313 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.25□□□□□ -0.13
Hoxc11P31313 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.25□□□□□ -0.13
Hoxc11P31313 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc11P31313 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc11P31313 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc11P31313 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc11P31313 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc11P31313 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc11P31313 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.25□□□□□ -0.13
Hoxc11P31313 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc11P31313 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc11P31313 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc11P31313 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc11P31313 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc11P31313 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Hoxc11P31313 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Hoxc11P31313 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc11P31313 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc11P31313 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc11P31313 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Hoxc11P31313 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc11P31313 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc11P31313 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc11P31313 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc11P31313 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Hoxc11P31313 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc11P31313 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc11P31313 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc11P31313 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc11P31313 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Hoxc11P31313 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Hoxc11P31313 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc11P31313 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc11P31313 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc11P31313 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc11P31313 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc11P31313 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc11P31313 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc11P31313 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc11P31313 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Hoxc11P31313 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc11P31313 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc11P31313 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc11P31313 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Hoxc11P31313 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc11P31313 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.24□□□□□ -0.13
Hoxc11P31313 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc11P31313 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc11P31313 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc11P31313 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.24□□□□□ -0.13
Hoxc11P31313 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc11P31313 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.24□□□□□ -0.13
Hoxc11P31313 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc11P31313 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Hoxc11P31313 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc11P31313 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc11P31313 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Hoxc11P31313 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc11P31313 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc11P31313 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Hoxc11P31313 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.24□□□□□ -0.13
Hoxc11P31313 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc11P31313 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Hoxc11P31313 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms