Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Mmp3P28862 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Mmp3P28862 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.7■□□□□ 0.1
Mmp3P28862 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.7■□□□□ 0.1
Mmp3P28862 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.7■□□□□ 0.1
Mmp3P28862 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Mmp3P28862 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.7■□□□□ 0.1
Mmp3P28862 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Mmp3P28862 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Mmp3P28862 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.7■□□□□ 0.1
Mmp3P28862 Gm46209-201ENSMUST00000217912 553 ntBASIC15.7■□□□□ 0.1
Mmp3P28862 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Mmp3P28862 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Mmp3P28862 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Mmp3P28862 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Mmp3P28862 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Mmp3P28862 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Mmp3P28862 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Mmp3P28862 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Mmp3P28862 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Mmp3P28862 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp3P28862 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp3P28862 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Mmp3P28862 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp3P28862 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Mmp3P28862 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp3P28862 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp3P28862 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp3P28862 Gm23547-201ENSMUST00000158210 271 ntBASIC15.69■□□□□ 0.1
Mmp3P28862 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp3P28862 Gm27838-201ENSMUST00000184829 128 ntBASIC15.69■□□□□ 0.1
Mmp3P28862 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Mmp3P28862 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp3P28862 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp3P28862 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp3P28862 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Mmp3P28862 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp3P28862 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp3P28862 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp3P28862 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp3P28862 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp3P28862 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp3P28862 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp3P28862 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp3P28862 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp3P28862 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.69■□□□□ 0.1
Mmp3P28862 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp3P28862 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp3P28862 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp3P28862 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.68■□□□□ 0.1
Mmp3P28862 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.68■□□□□ 0.1
Mmp3P28862 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp3P28862 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.68■□□□□ 0.1
Mmp3P28862 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp3P28862 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Mmp3P28862 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp3P28862 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp3P28862 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.68■□□□□ 0.1
Mmp3P28862 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp3P28862 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp3P28862 Gm15653-201ENSMUST00000119247 907 ntBASIC15.68■□□□□ 0.1
Mmp3P28862 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.68■□□□□ 0.1
Mmp3P28862 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp3P28862 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Mmp3P28862 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp3P28862 Gm7730-201ENSMUST00000212486 454 ntBASIC15.68■□□□□ 0.1
Mmp3P28862 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp3P28862 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp3P28862 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp3P28862 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp3P28862 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp3P28862 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp3P28862 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp3P28862 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp3P28862 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp3P28862 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp3P28862 Syt7-204ENSMUST00000223586 1344 ntBASIC15.68■□□□□ 0.1
Mmp3P28862 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp3P28862 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp3P28862 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp3P28862 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Mmp3P28862 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp3P28862 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp3P28862 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp3P28862 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp3P28862 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp3P28862 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp3P28862 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.67■□□□□ 0.1
Mmp3P28862 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp3P28862 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp3P28862 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Mmp3P28862 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.67■□□□□ 0.1
Mmp3P28862 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.67■□□□□ 0.1
Mmp3P28862 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.67■□□□□ 0.1
Mmp3P28862 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15.67■□□□□ 0.1
Mmp3P28862 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.67■□□□□ 0.1
Mmp3P28862 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp3P28862 Gm16215-201ENSMUST00000161990 637 ntBASIC15.67■□□□□ 0.1
Mmp3P28862 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.67■□□□□ 0.1
Mmp3P28862 Gm43703-201ENSMUST00000200523 763 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms