Protein–RNA interactions for Protein: P25233

Ndn, Necdin, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NdnP25233 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
NdnP25233 Gm16061-201ENSMUST00000122167 857 ntBASIC11.83□□□□□ -0.52
NdnP25233 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NdnP25233 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NdnP25233 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
NdnP25233 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC11.83□□□□□ -0.52
NdnP25233 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC11.83□□□□□ -0.52
NdnP25233 Gm2274-201ENSMUST00000184539 609 ntBASIC11.83□□□□□ -0.52
NdnP25233 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NdnP25233 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NdnP25233 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NdnP25233 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NdnP25233 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NdnP25233 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
NdnP25233 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NdnP25233 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NdnP25233 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NdnP25233 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NdnP25233 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NdnP25233 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NdnP25233 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
NdnP25233 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NdnP25233 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NdnP25233 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.83□□□□□ -0.52
NdnP25233 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NdnP25233 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NdnP25233 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NdnP25233 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
NdnP25233 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.83□□□□□ -0.52
NdnP25233 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NdnP25233 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NdnP25233 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NdnP25233 AC154855.1-201ENSMUST00000227353 1458 ntBASIC11.83□□□□□ -0.52
NdnP25233 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NdnP25233 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NdnP25233 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NdnP25233 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
NdnP25233 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC11.82□□□□□ -0.52
NdnP25233 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NdnP25233 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NdnP25233 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.82□□□□□ -0.52
NdnP25233 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
NdnP25233 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NdnP25233 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
NdnP25233 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC11.82□□□□□ -0.52
NdnP25233 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC11.82□□□□□ -0.52
NdnP25233 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC11.82□□□□□ -0.52
NdnP25233 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC11.82□□□□□ -0.52
NdnP25233 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
NdnP25233 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
NdnP25233 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC11.82□□□□□ -0.52
NdnP25233 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC11.82□□□□□ -0.52
NdnP25233 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
NdnP25233 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
NdnP25233 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NdnP25233 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
NdnP25233 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NdnP25233 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
NdnP25233 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NdnP25233 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
NdnP25233 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NdnP25233 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NdnP25233 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
NdnP25233 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.82□□□□□ -0.52
NdnP25233 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NdnP25233 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NdnP25233 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
NdnP25233 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NdnP25233 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NdnP25233 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NdnP25233 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NdnP25233 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NdnP25233 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NdnP25233 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NdnP25233 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NdnP25233 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
NdnP25233 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NdnP25233 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NdnP25233 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NdnP25233 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NdnP25233 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NdnP25233 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NdnP25233 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NdnP25233 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC11.81□□□□□ -0.52
NdnP25233 Gm13186-201ENSMUST00000118031 316 ntBASIC11.81□□□□□ -0.52
NdnP25233 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC11.81□□□□□ -0.52
NdnP25233 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NdnP25233 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC11.81□□□□□ -0.52
NdnP25233 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NdnP25233 Gm18115-201ENSMUST00000221209 621 ntBASIC11.81□□□□□ -0.52
NdnP25233 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
NdnP25233 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NdnP25233 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NdnP25233 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NdnP25233 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NdnP25233 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
NdnP25233 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.81□□□□□ -0.52
NdnP25233 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
NdnP25233 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
NdnP25233 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms