Protein–RNA interactions for Protein: P06336

Ig epsilon chain C region, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06336 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
P06336 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
P06336 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
P06336 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P06336 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
P06336 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P06336 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
P06336 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
P06336 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
P06336 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
P06336 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P06336 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P06336 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
P06336 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
P06336 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P06336 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
P06336 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
P06336 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.57□□□□□ -0.24
P06336 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.57□□□□□ -0.24
P06336 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06336 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06336 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06336 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06336 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
P06336 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06336 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06336 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
P06336 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
P06336 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.57□□□□□ -0.24
P06336 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
P06336 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06336 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06336 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
P06336 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06336 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06336 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06336 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06336 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06336 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
P06336 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06336 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06336 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06336 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06336 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06336 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06336 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06336 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
P06336 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06336 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06336 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.56□□□□□ -0.24
P06336 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06336 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.56□□□□□ -0.24
P06336 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06336 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.56□□□□□ -0.24
P06336 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
P06336 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06336 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.56□□□□□ -0.24
P06336 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06336 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
P06336 Gm6973-201ENSMUST00000117080 721 ntBASIC13.56□□□□□ -0.24
P06336 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
P06336 Gm11745-201ENSMUST00000121669 448 ntBASIC13.56□□□□□ -0.24
P06336 Mir1895-201ENSMUST00000122615 79 ntBASIC13.56□□□□□ -0.24
P06336 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
P06336 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
P06336 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06336 Gm27702-201ENSMUST00000184512 56 ntBASIC13.56□□□□□ -0.24
P06336 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.56□□□□□ -0.24
P06336 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.56□□□□□ -0.24
P06336 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06336 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06336 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06336 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.56□□□□□ -0.24
P06336 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
P06336 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06336 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06336 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
P06336 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06336 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
P06336 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06336 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06336 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06336 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06336 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06336 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06336 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06336 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06336 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06336 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06336 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06336 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06336 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06336 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06336 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06336 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06336 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06336 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06336 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
P06336 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06336 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms