Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Igh-VJ558P01758 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Igh-VJ558P01758 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Igh-VJ558P01758 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Igh-VJ558P01758 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Igh-VJ558P01758 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Igh-VJ558P01758 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Igh-VJ558P01758 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.38
Igh-VJ558P01758 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Igh-VJ558P01758 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Igh-VJ558P01758 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Igh-VJ558P01758 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Igh-VJ558P01758 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Igh-VJ558P01758 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Igh-VJ558P01758 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Igh-VJ558P01758 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Igh-VJ558P01758 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Igh-VJ558P01758 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Igh-VJ558P01758 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Igh-VJ558P01758 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Igh-VJ558P01758 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Igh-VJ558P01758 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Igh-VJ558P01758 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.7□□□□□ -0.38
Igh-VJ558P01758 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Igh-VJ558P01758 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Igh-VJ558P01758 Mir8117-201ENSMUST00000184773 107 ntBASIC12.7□□□□□ -0.38
Igh-VJ558P01758 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.7□□□□□ -0.38
Igh-VJ558P01758 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.7□□□□□ -0.38
Igh-VJ558P01758 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Igh-VJ558P01758 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.7□□□□□ -0.38
Igh-VJ558P01758 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Igh-VJ558P01758 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Igh-VJ558P01758 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Igh-VJ558P01758 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Igh-VJ558P01758 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Igh-VJ558P01758 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Igh-VJ558P01758 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Igh-VJ558P01758 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Igh-VJ558P01758 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.7□□□□□ -0.38
Igh-VJ558P01758 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Igh-VJ558P01758 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Igh-VJ558P01758 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Igh-VJ558P01758 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Igh-VJ558P01758 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.7□□□□□ -0.38
Igh-VJ558P01758 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Igh-VJ558P01758 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Igh-VJ558P01758 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Gm15483-201ENSMUST00000120338 456 ntBASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Gm37230-201ENSMUST00000194491 818 ntBASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Igh-VJ558P01758 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igh-VJ558P01758 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igh-VJ558P01758 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igh-VJ558P01758 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igh-VJ558P01758 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igh-VJ558P01758 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igh-VJ558P01758 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Igh-VJ558P01758 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igh-VJ558P01758 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Igh-VJ558P01758 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Igh-VJ558P01758 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms