Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.41□□□□□ -0.42
Ifna1P01572 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ifna1P01572 Gm15372-201ENSMUST00000120729 834 ntBASIC12.41□□□□□ -0.42
Ifna1P01572 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ifna1P01572 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ifna1P01572 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.41□□□□□ -0.42
Ifna1P01572 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ifna1P01572 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.41□□□□□ -0.42
Ifna1P01572 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.41□□□□□ -0.42
Ifna1P01572 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.41□□□□□ -0.42
Ifna1P01572 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Ifna1P01572 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.41□□□□□ -0.42
Ifna1P01572 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ifna1P01572 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ifna1P01572 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ifna1P01572 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ifna1P01572 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ifna1P01572 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ifna1P01572 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ifna1P01572 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ifna1P01572 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Ifna1P01572 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ifna1P01572 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ifna1P01572 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Ifna1P01572 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ifna1P01572 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ifna1P01572 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ifna1P01572 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ifna1P01572 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ifna1P01572 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ifna1P01572 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ifna1P01572 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ifna1P01572 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ifna1P01572 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ifna1P01572 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ifna1P01572 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ifna1P01572 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ifna1P01572 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ifna1P01572 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ifna1P01572 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Ifna1P01572 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ifna1P01572 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ifna1P01572 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Ifna1P01572 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.4□□□□□ -0.42
Ifna1P01572 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ifna1P01572 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.4□□□□□ -0.42
Ifna1P01572 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.4□□□□□ -0.42
Ifna1P01572 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ifna1P01572 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ifna1P01572 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.4□□□□□ -0.42
Ifna1P01572 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ifna1P01572 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ifna1P01572 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ifna1P01572 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ifna1P01572 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.4□□□□□ -0.42
Ifna1P01572 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ifna1P01572 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ifna1P01572 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Ifna1P01572 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ifna1P01572 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ifna1P01572 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ifna1P01572 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ifna1P01572 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Ifna1P01572 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.4□□□□□ -0.42
Ifna1P01572 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.4□□□□□ -0.42
Ifna1P01572 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ifna1P01572 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ifna1P01572 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ifna1P01572 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ifna1P01572 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Ifna1P01572 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ifna1P01572 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Ifna1P01572 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ifna1P01572 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Ifna1P01572 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ifna1P01572 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ifna1P01572 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ifna1P01572 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Ifna1P01572 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ifna1P01572 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ifna1P01572 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ifna1P01572 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ifna1P01572 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.39□□□□□ -0.43
Ifna1P01572 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ifna1P01572 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ifna1P01572 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.39□□□□□ -0.43
Ifna1P01572 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ifna1P01572 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ifna1P01572 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ifna1P01572 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ifna1P01572 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.39□□□□□ -0.43
Ifna1P01572 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ifna1P01572 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.39□□□□□ -0.43
Ifna1P01572 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ifna1P01572 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ifna1P01572 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ifna1P01572 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ifna1P01572 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ifna1P01572 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ifna1P01572 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms