Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf17O88472 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Tnfrsf17O88472 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.61□□□□□ -0.23
Tnfrsf17O88472 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.61□□□□□ -0.23
Tnfrsf17O88472 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.61□□□□□ -0.23
Tnfrsf17O88472 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.61□□□□□ -0.23
Tnfrsf17O88472 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.61□□□□□ -0.23
Tnfrsf17O88472 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf17O88472 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Tnfrsf17O88472 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf17O88472 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf17O88472 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf17O88472 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.61□□□□□ -0.23
Tnfrsf17O88472 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf17O88472 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf17O88472 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf17O88472 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf17O88472 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.6□□□□□ -0.23
Tnfrsf17O88472 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.6□□□□□ -0.23
Tnfrsf17O88472 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf17O88472 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf17O88472 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf17O88472 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Tnfrsf17O88472 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.6□□□□□ -0.23
Tnfrsf17O88472 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf17O88472 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Tnfrsf17O88472 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.6□□□□□ -0.23
Tnfrsf17O88472 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf17O88472 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.6□□□□□ -0.23
Tnfrsf17O88472 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf17O88472 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.6□□□□□ -0.23
Tnfrsf17O88472 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Tnfrsf17O88472 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Tnfrsf17O88472 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Tnfrsf17O88472 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.6□□□□□ -0.23
Tnfrsf17O88472 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf17O88472 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.6□□□□□ -0.23
Tnfrsf17O88472 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf17O88472 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf17O88472 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf17O88472 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf17O88472 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Tnfrsf17O88472 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf17O88472 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf17O88472 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf17O88472 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf17O88472 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf17O88472 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf17O88472 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.6□□□□□ -0.23
Tnfrsf17O88472 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf17O88472 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Tnfrsf17O88472 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf17O88472 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf17O88472 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Tnfrsf17O88472 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf17O88472 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.59□□□□□ -0.23
Tnfrsf17O88472 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf17O88472 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf17O88472 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf17O88472 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf17O88472 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf17O88472 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf17O88472 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.59□□□□□ -0.23
Tnfrsf17O88472 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf17O88472 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.59□□□□□ -0.23
Tnfrsf17O88472 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf17O88472 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Tnfrsf17O88472 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf17O88472 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf17O88472 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf17O88472 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf17O88472 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf17O88472 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf17O88472 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf17O88472 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.58□□□□□ -0.23
Tnfrsf17O88472 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Tnfrsf17O88472 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Tnfrsf17O88472 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Tnfrsf17O88472 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Tnfrsf17O88472 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Tnfrsf17O88472 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf17O88472 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf17O88472 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Tnfrsf17O88472 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Tnfrsf17O88472 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf17O88472 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf17O88472 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf17O88472 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf17O88472 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf17O88472 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf17O88472 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf17O88472 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Tnfrsf17O88472 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Tnfrsf17O88472 Gm12585-201ENSMUST00000117307 290 ntBASIC13.58□□□□□ -0.24
Tnfrsf17O88472 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.58□□□□□ -0.24
Tnfrsf17O88472 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.58□□□□□ -0.24
Tnfrsf17O88472 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf17O88472 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf17O88472 Gm27486-201ENSMUST00000184923 80 ntBASIC13.58□□□□□ -0.24
Tnfrsf17O88472 Gm27731-201ENSMUST00000185192 107 ntBASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms