Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1bO88384 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1bO88384 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1bO88384 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1bO88384 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1bO88384 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1bO88384 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1bO88384 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1bO88384 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1bO88384 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.03□□□□□ -0.16
Vti1bO88384 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1bO88384 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Vti1bO88384 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1bO88384 Mir5131-201ENSMUST00000175426 93 ntBASIC14.03□□□□□ -0.16
Vti1bO88384 Gm37153-201ENSMUST00000193637 231 ntBASIC14.03□□□□□ -0.16
Vti1bO88384 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.03□□□□□ -0.16
Vti1bO88384 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1bO88384 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1bO88384 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1bO88384 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Vti1bO88384 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1bO88384 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Vti1bO88384 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.03□□□□□ -0.16
Vti1bO88384 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1bO88384 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1bO88384 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1bO88384 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1bO88384 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1bO88384 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1bO88384 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1bO88384 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vti1bO88384 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vti1bO88384 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vti1bO88384 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Vti1bO88384 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.02□□□□□ -0.16
Vti1bO88384 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vti1bO88384 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vti1bO88384 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Vti1bO88384 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.02□□□□□ -0.16
Vti1bO88384 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vti1bO88384 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Vti1bO88384 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vti1bO88384 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vti1bO88384 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.02□□□□□ -0.16
Vti1bO88384 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vti1bO88384 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.02□□□□□ -0.16
Vti1bO88384 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vti1bO88384 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vti1bO88384 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.02□□□□□ -0.17
Vti1bO88384 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vti1bO88384 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vti1bO88384 Gm18489-201ENSMUST00000172565 551 ntBASIC14.02□□□□□ -0.17
Vti1bO88384 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vti1bO88384 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.02□□□□□ -0.17
Vti1bO88384 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.02□□□□□ -0.17
Vti1bO88384 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.02□□□□□ -0.17
Vti1bO88384 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vti1bO88384 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vti1bO88384 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vti1bO88384 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vti1bO88384 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Vti1bO88384 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vti1bO88384 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vti1bO88384 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vti1bO88384 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vti1bO88384 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vti1bO88384 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vti1bO88384 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vti1bO88384 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vti1bO88384 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vti1bO88384 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vti1bO88384 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vti1bO88384 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vti1bO88384 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vti1bO88384 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Vti1bO88384 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.01□□□□□ -0.17
Vti1bO88384 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1bO88384 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1bO88384 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1bO88384 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.01□□□□□ -0.17
Vti1bO88384 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.01□□□□□ -0.17
Vti1bO88384 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1bO88384 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Vti1bO88384 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1bO88384 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1bO88384 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1bO88384 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1bO88384 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1bO88384 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1bO88384 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1bO88384 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1bO88384 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1bO88384 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1bO88384 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.01□□□□□ -0.17
Vti1bO88384 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Vti1bO88384 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Vti1bO88384 Gm8318-201ENSMUST00000182954 872 ntBASIC14.01□□□□□ -0.17
Vti1bO88384 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1bO88384 Gm2651-201ENSMUST00000203560 838 ntBASIC14.01□□□□□ -0.17
Vti1bO88384 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms