Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn2O70591 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn2O70591 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn2O70591 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn2O70591 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn2O70591 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn2O70591 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.29□□□□□ -0.44
Pfdn2O70591 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn2O70591 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.29□□□□□ -0.44
Pfdn2O70591 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn2O70591 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn2O70591 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn2O70591 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn2O70591 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn2O70591 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn2O70591 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn2O70591 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn2O70591 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn2O70591 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn2O70591 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.29□□□□□ -0.44
Pfdn2O70591 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn2O70591 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn2O70591 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.29□□□□□ -0.44
Pfdn2O70591 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pfdn2O70591 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.29□□□□□ -0.44
Pfdn2O70591 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pfdn2O70591 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn2O70591 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Pfdn2O70591 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn2O70591 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Pfdn2O70591 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn2O70591 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.29□□□□□ -0.44
Pfdn2O70591 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn2O70591 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Pfdn2O70591 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn2O70591 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Pfdn2O70591 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Pfdn2O70591 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn2O70591 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn2O70591 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
Pfdn2O70591 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn2O70591 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn2O70591 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn2O70591 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn2O70591 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn2O70591 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn2O70591 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn2O70591 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn2O70591 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn2O70591 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn2O70591 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn2O70591 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.28□□□□□ -0.44
Pfdn2O70591 Gm11950-201ENSMUST00000121615 838 ntBASIC12.28□□□□□ -0.44
Pfdn2O70591 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn2O70591 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.28□□□□□ -0.44
Pfdn2O70591 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.28□□□□□ -0.44
Pfdn2O70591 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.28□□□□□ -0.44
Pfdn2O70591 Gm10252-201ENSMUST00000209541 832 ntBASIC12.28□□□□□ -0.44
Pfdn2O70591 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn2O70591 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn2O70591 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn2O70591 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn2O70591 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn2O70591 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn2O70591 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn2O70591 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn2O70591 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn2O70591 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn2O70591 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn2O70591 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pfdn2O70591 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pfdn2O70591 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pfdn2O70591 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Pfdn2O70591 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.27□□□□□ -0.44
Pfdn2O70591 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pfdn2O70591 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Pfdn2O70591 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pfdn2O70591 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Pfdn2O70591 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pfdn2O70591 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pfdn2O70591 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn2O70591 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn2O70591 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn2O70591 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn2O70591 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn2O70591 Rprl3-201ENSMUST00000157400 290 ntBASIC12.27□□□□□ -0.45
Pfdn2O70591 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn2O70591 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.27□□□□□ -0.45
Pfdn2O70591 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.27□□□□□ -0.45
Pfdn2O70591 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn2O70591 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Pfdn2O70591 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.27□□□□□ -0.45
Pfdn2O70591 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Pfdn2O70591 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Pfdn2O70591 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn2O70591 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn2O70591 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn2O70591 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn2O70591 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn2O70591 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms