Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pde6dO55057 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pde6dO55057 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pde6dO55057 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pde6dO55057 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pde6dO55057 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pde6dO55057 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pde6dO55057 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pde6dO55057 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pde6dO55057 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Pde6dO55057 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Pde6dO55057 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pde6dO55057 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pde6dO55057 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pde6dO55057 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pde6dO55057 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pde6dO55057 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.59□□□□□ -0.55
Pde6dO55057 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.59□□□□□ -0.55
Pde6dO55057 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pde6dO55057 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.59□□□□□ -0.55
Pde6dO55057 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Pde6dO55057 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pde6dO55057 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pde6dO55057 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pde6dO55057 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC11.59□□□□□ -0.55
Pde6dO55057 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pde6dO55057 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC11.59□□□□□ -0.55
Pde6dO55057 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pde6dO55057 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Pde6dO55057 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pde6dO55057 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC11.59□□□□□ -0.55
Pde6dO55057 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC11.59□□□□□ -0.55
Pde6dO55057 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.59□□□□□ -0.55
Pde6dO55057 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pde6dO55057 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pde6dO55057 AC158538.2-201ENSMUST00000225455 906 ntBASIC11.59□□□□□ -0.55
Pde6dO55057 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pde6dO55057 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pde6dO55057 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Pde6dO55057 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pde6dO55057 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pde6dO55057 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pde6dO55057 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pde6dO55057 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pde6dO55057 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Pde6dO55057 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pde6dO55057 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pde6dO55057 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pde6dO55057 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pde6dO55057 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pde6dO55057 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pde6dO55057 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pde6dO55057 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pde6dO55057 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Pde6dO55057 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Pde6dO55057 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Pde6dO55057 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Pde6dO55057 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pde6dO55057 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pde6dO55057 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pde6dO55057 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pde6dO55057 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pde6dO55057 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pde6dO55057 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pde6dO55057 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pde6dO55057 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pde6dO55057 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pde6dO55057 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Pde6dO55057 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC11.58□□□□□ -0.56
Pde6dO55057 Gm8349-201ENSMUST00000182720 1003 ntBASIC11.58□□□□□ -0.56
Pde6dO55057 Gm27389-201ENSMUST00000183622 195 ntBASIC11.58□□□□□ -0.56
Pde6dO55057 Gm9172-201ENSMUST00000212092 954 ntBASIC11.58□□□□□ -0.56
Pde6dO55057 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pde6dO55057 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pde6dO55057 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pde6dO55057 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pde6dO55057 Zkscan4-202ENSMUST00000225845 1506 ntBASIC11.58□□□□□ -0.56
Pde6dO55057 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pde6dO55057 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pde6dO55057 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pde6dO55057 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pde6dO55057 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Pde6dO55057 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pde6dO55057 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pde6dO55057 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.58□□□□□ -0.56
Pde6dO55057 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.58□□□□□ -0.56
Pde6dO55057 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pde6dO55057 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pde6dO55057 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pde6dO55057 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pde6dO55057 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pde6dO55057 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.57□□□□□ -0.56
Pde6dO55057 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pde6dO55057 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pde6dO55057 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pde6dO55057 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.57□□□□□ -0.56
Pde6dO55057 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Pde6dO55057 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pde6dO55057 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.57□□□□□ -0.56
Pde6dO55057 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms