Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AC104692.2-201ENST00000603054 253 ntBASIC19.85■□□□□ 0.77
CHMP2AO43633 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP2AO43633 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.85■□□□□ 0.77
CHMP2AO43633 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.85■□□□□ 0.77
CHMP2AO43633 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CHMP2AO43633 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP2AO43633 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP2AO43633 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.85■□□□□ 0.77
CHMP2AO43633 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP2AO43633 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP2AO43633 AP005117.1-201ENST00000584346 1413 ntBASIC19.85■□□□□ 0.77
CHMP2AO43633 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.84■□□□□ 0.77
CHMP2AO43633 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.84■□□□□ 0.77
CHMP2AO43633 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP2AO43633 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP2AO43633 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.84■□□□□ 0.77
CHMP2AO43633 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.84■□□□□ 0.77
CHMP2AO43633 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP2AO43633 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP2AO43633 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
CHMP2AO43633 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP2AO43633 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP2AO43633 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP2AO43633 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
CHMP2AO43633 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.84■□□□□ 0.77
CHMP2AO43633 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP2AO43633 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
CHMP2AO43633 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.84■□□□□ 0.77
CHMP2AO43633 AP002469.2-201ENST00000531724 424 ntBASIC19.84■□□□□ 0.77
CHMP2AO43633 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.84■□□□□ 0.77
CHMP2AO43633 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.84■□□□□ 0.77
CHMP2AO43633 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.84■□□□□ 0.77
CHMP2AO43633 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.84■□□□□ 0.77
CHMP2AO43633 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP2AO43633 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.84■□□□□ 0.77
CHMP2AO43633 AL355877.3-201ENST00000622820 899 ntBASIC19.84■□□□□ 0.77
CHMP2AO43633 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CHMP2AO43633 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CHMP2AO43633 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.84■□□□□ 0.77
CHMP2AO43633 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP2AO43633 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP2AO43633 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CHMP2AO43633 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.84■□□□□ 0.77
CHMP2AO43633 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.83■□□□□ 0.77
CHMP2AO43633 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP2AO43633 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP2AO43633 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CHMP2AO43633 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP2AO43633 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP2AO43633 RBM17P3-201ENST00000417687 1192 ntBASIC19.83■□□□□ 0.77
CHMP2AO43633 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.83■□□□□ 0.77
CHMP2AO43633 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
CHMP2AO43633 FGFR3P6-201ENST00000457012 610 ntBASIC19.83■□□□□ 0.77
CHMP2AO43633 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.83■□□□□ 0.77
CHMP2AO43633 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CHMP2AO43633 AC109462.3-201ENST00000573934 613 ntBASIC19.83■□□□□ 0.77
CHMP2AO43633 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.83■□□□□ 0.77
CHMP2AO43633 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP2AO43633 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.83■□□□□ 0.76
CHMP2AO43633 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CHMP2AO43633 AC008764.6-201ENST00000595909 2069 ntBASIC19.83■□□□□ 0.76
CHMP2AO43633 KRT8P10-201ENST00000450021 1447 ntBASIC19.83■□□□□ 0.76
CHMP2AO43633 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.83■□□□□ 0.76
CHMP2AO43633 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.83■□□□□ 0.76
CHMP2AO43633 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
CHMP2AO43633 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CHMP2AO43633 AL133373.2-201ENST00000623187 2828 ntBASIC19.83■□□□□ 0.76
CHMP2AO43633 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
CHMP2AO43633 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
CHMP2AO43633 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CHMP2AO43633 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.82■□□□□ 0.76
CHMP2AO43633 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CHMP2AO43633 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CHMP2AO43633 FZD10-202ENST00000539839 3282 ntBASIC19.82■□□□□ 0.76
CHMP2AO43633 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
CHMP2AO43633 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
CHMP2AO43633 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP2AO43633 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP2AO43633 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP2AO43633 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.82■□□□□ 0.76
CHMP2AO43633 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.82■□□□□ 0.76
CHMP2AO43633 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.82■□□□□ 0.76
CHMP2AO43633 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.82■□□□□ 0.76
CHMP2AO43633 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP2AO43633 AL160237.2-201ENST00000556165 472 ntBASIC19.82■□□□□ 0.76
CHMP2AO43633 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.82■□□□□ 0.76
CHMP2AO43633 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.82■□□□□ 0.76
CHMP2AO43633 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.82■□□□□ 0.76
CHMP2AO43633 AC019129.2-201ENST00000609837 1235 ntBASIC19.82■□□□□ 0.76
CHMP2AO43633 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP2AO43633 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP2AO43633 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP2AO43633 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP2AO43633 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.82■□□□□ 0.76
CHMP2AO43633 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CHMP2AO43633 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP2AO43633 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.82■□□□□ 0.76
CHMP2AO43633 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP2AO43633 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CHMP2AO43633 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms