Protein–RNA interactions for Protein: O35874

Slc1a4, Neutral amino acid transporter A, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a4O35874 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc1a4O35874 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc1a4O35874 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc1a4O35874 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc1a4O35874 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc1a4O35874 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.27■□□□□ 0.35
Slc1a4O35874 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.26■□□□□ 0.35
Slc1a4O35874 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Slc1a4O35874 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Slc1a4O35874 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Slc1a4O35874 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc1a4O35874 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.26■□□□□ 0.35
Slc1a4O35874 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc1a4O35874 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc1a4O35874 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Slc1a4O35874 Gm24158-201ENSMUST00000175263 71 ntBASIC17.26■□□□□ 0.35
Slc1a4O35874 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slc1a4O35874 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.26■□□□□ 0.35
Slc1a4O35874 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slc1a4O35874 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.26■□□□□ 0.35
Slc1a4O35874 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slc1a4O35874 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc1a4O35874 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc1a4O35874 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slc1a4O35874 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc1a4O35874 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.26■□□□□ 0.35
Slc1a4O35874 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc1a4O35874 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc1a4O35874 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Slc1a4O35874 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Slc1a4O35874 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc1a4O35874 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc1a4O35874 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Slc1a4O35874 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc1a4O35874 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc1a4O35874 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.25■□□□□ 0.35
Slc1a4O35874 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc1a4O35874 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc1a4O35874 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Slc1a4O35874 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc1a4O35874 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc1a4O35874 Mir449b-201ENSMUST00000104833 80 ntBASIC17.25■□□□□ 0.35
Slc1a4O35874 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Slc1a4O35874 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Slc1a4O35874 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.25■□□□□ 0.35
Slc1a4O35874 Gm7774-201ENSMUST00000200064 533 ntBASIC17.25■□□□□ 0.35
Slc1a4O35874 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.25■□□□□ 0.35
Slc1a4O35874 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc1a4O35874 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc1a4O35874 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Slc1a4O35874 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc1a4O35874 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.25■□□□□ 0.35
Slc1a4O35874 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc1a4O35874 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc1a4O35874 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc1a4O35874 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc1a4O35874 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc1a4O35874 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc1a4O35874 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc1a4O35874 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Slc1a4O35874 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc1a4O35874 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Slc1a4O35874 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc1a4O35874 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc1a4O35874 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Slc1a4O35874 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc1a4O35874 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc1a4O35874 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Slc1a4O35874 Gm13616-201ENSMUST00000120600 222 ntBASIC17.24■□□□□ 0.35
Slc1a4O35874 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc1a4O35874 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Slc1a4O35874 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC17.24■□□□□ 0.35
Slc1a4O35874 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.24■□□□□ 0.35
Slc1a4O35874 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.24■□□□□ 0.35
Slc1a4O35874 Gm10253-201ENSMUST00000194270 940 ntBASIC17.24■□□□□ 0.35
Slc1a4O35874 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Slc1a4O35874 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.24■□□□□ 0.35
Slc1a4O35874 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.24■□□□□ 0.35
Slc1a4O35874 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc1a4O35874 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Slc1a4O35874 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc1a4O35874 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc1a4O35874 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc1a4O35874 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Slc1a4O35874 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Slc1a4O35874 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Slc1a4O35874 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc1a4O35874 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc1a4O35874 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc1a4O35874 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc1a4O35874 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Slc1a4O35874 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc1a4O35874 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.23■□□□□ 0.35
Slc1a4O35874 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc1a4O35874 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.23■□□□□ 0.35
Slc1a4O35874 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc1a4O35874 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc1a4O35874 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc1a4O35874 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.23■□□□□ 0.35
Slc1a4O35874 Gm5479-201ENSMUST00000160578 435 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms