Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.35□□□□□ -0.11
Npc1O35604 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Npc1O35604 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Npc1O35604 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Npc1O35604 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Npc1O35604 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Npc1O35604 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Npc1O35604 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.35□□□□□ -0.11
Npc1O35604 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.35□□□□□ -0.11
Npc1O35604 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
Npc1O35604 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.35□□□□□ -0.11
Npc1O35604 Gm20553-201ENSMUST00000204205 844 ntBASIC14.35□□□□□ -0.11
Npc1O35604 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Npc1O35604 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.35□□□□□ -0.11
Npc1O35604 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.35□□□□□ -0.11
Npc1O35604 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Npc1O35604 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.35□□□□□ -0.11
Npc1O35604 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Npc1O35604 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.35□□□□□ -0.11
Npc1O35604 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Npc1O35604 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Npc1O35604 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Npc1O35604 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Npc1O35604 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Npc1O35604 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Npc1O35604 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Npc1O35604 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Npc1O35604 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Npc1O35604 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.34□□□□□ -0.11
Npc1O35604 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Npc1O35604 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Npc1O35604 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Npc1O35604 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Npc1O35604 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Npc1O35604 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.34□□□□□ -0.11
Npc1O35604 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Npc1O35604 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Npc1O35604 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Npc1O35604 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Npc1O35604 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Npc1O35604 Gm11543-201ENSMUST00000120758 370 ntBASIC14.34□□□□□ -0.11
Npc1O35604 Gm18889-201ENSMUST00000174284 929 ntBASIC14.34□□□□□ -0.11
Npc1O35604 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.34□□□□□ -0.11
Npc1O35604 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Npc1O35604 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.34□□□□□ -0.11
Npc1O35604 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Npc1O35604 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.34□□□□□ -0.11
Npc1O35604 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Npc1O35604 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Npc1O35604 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Npc1O35604 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Npc1O35604 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Npc1O35604 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Npc1O35604 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.33□□□□□ -0.11
Npc1O35604 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Npc1O35604 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Npc1O35604 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Npc1O35604 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Npc1O35604 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Npc1O35604 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Npc1O35604 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Npc1O35604 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.33□□□□□ -0.12
Npc1O35604 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Npc1O35604 Gm11745-201ENSMUST00000121669 448 ntBASIC14.33□□□□□ -0.12
Npc1O35604 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Npc1O35604 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Npc1O35604 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Npc1O35604 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Npc1O35604 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Npc1O35604 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.33□□□□□ -0.12
Npc1O35604 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Npc1O35604 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Npc1O35604 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Npc1O35604 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Npc1O35604 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Npc1O35604 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Npc1O35604 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Npc1O35604 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Npc1O35604 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Npc1O35604 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Npc1O35604 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Npc1O35604 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Npc1O35604 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Npc1O35604 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Npc1O35604 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Npc1O35604 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Npc1O35604 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Npc1O35604 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.32□□□□□ -0.12
Npc1O35604 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.32□□□□□ -0.12
Npc1O35604 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Npc1O35604 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Npc1O35604 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Npc1O35604 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Npc1O35604 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Npc1O35604 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Npc1O35604 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Npc1O35604 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
Npc1O35604 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Npc1O35604 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Npc1O35604 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms