Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ebf3O08791 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ebf3O08791 Gm15693-201ENSMUST00000120470 637 ntBASIC15.28■□□□□ 0.04
Ebf3O08791 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ebf3O08791 Gm17837-201ENSMUST00000186435 985 ntBASIC15.28■□□□□ 0.04
Ebf3O08791 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.28■□□□□ 0.04
Ebf3O08791 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ebf3O08791 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ebf3O08791 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ebf3O08791 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ebf3O08791 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
Ebf3O08791 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ebf3O08791 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ebf3O08791 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ebf3O08791 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ebf3O08791 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ebf3O08791 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.28■□□□□ 0.04
Ebf3O08791 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ebf3O08791 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.28■□□□□ 0.04
Ebf3O08791 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ebf3O08791 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ebf3O08791 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ebf3O08791 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ebf3O08791 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ebf3O08791 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ebf3O08791 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ebf3O08791 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ebf3O08791 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ebf3O08791 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ebf3O08791 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ebf3O08791 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ebf3O08791 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ebf3O08791 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ebf3O08791 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ebf3O08791 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.27■□□□□ 0.04
Ebf3O08791 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.27■□□□□ 0.04
Ebf3O08791 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.27■□□□□ 0.04
Ebf3O08791 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ebf3O08791 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ebf3O08791 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.27■□□□□ 0.03
Ebf3O08791 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ebf3O08791 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ebf3O08791 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ebf3O08791 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.27■□□□□ 0.03
Ebf3O08791 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Ebf3O08791 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Ebf3O08791 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ebf3O08791 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ebf3O08791 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ebf3O08791 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ebf3O08791 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ebf3O08791 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf3O08791 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf3O08791 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf3O08791 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.26■□□□□ 0.03
Ebf3O08791 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf3O08791 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ebf3O08791 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ebf3O08791 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf3O08791 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf3O08791 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf3O08791 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.26■□□□□ 0.03
Ebf3O08791 Gm8410-201ENSMUST00000117225 605 ntBASIC15.26■□□□□ 0.03
Ebf3O08791 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.26■□□□□ 0.03
Ebf3O08791 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.26■□□□□ 0.03
Ebf3O08791 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.26■□□□□ 0.03
Ebf3O08791 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf3O08791 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf3O08791 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf3O08791 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf3O08791 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf3O08791 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf3O08791 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf3O08791 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf3O08791 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf3O08791 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ebf3O08791 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.26■□□□□ 0.03
Ebf3O08791 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Ebf3O08791 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.26■□□□□ 0.03
Ebf3O08791 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
Ebf3O08791 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.26■□□□□ 0.03
Ebf3O08791 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf3O08791 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf3O08791 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.25■□□□□ 0.03
Ebf3O08791 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ebf3O08791 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf3O08791 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf3O08791 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf3O08791 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf3O08791 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf3O08791 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.25■□□□□ 0.03
Ebf3O08791 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf3O08791 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf3O08791 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf3O08791 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf3O08791 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.25■□□□□ 0.03
Ebf3O08791 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf3O08791 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf3O08791 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.25■□□□□ 0.03
Ebf3O08791 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms