Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Gm2272-201ENSMUST00000194903 582 ntBASIC15.1■□□□□ 0.01
Atf6F6VAN0 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf6F6VAN0 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Atf6F6VAN0 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Atf6F6VAN0 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atf6F6VAN0 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Atf6F6VAN0 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Atf6F6VAN0 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atf6F6VAN0 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.09■□□□□ 0.01
Atf6F6VAN0 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atf6F6VAN0 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atf6F6VAN0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.09■□□□□ 0.01
Atf6F6VAN0 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.09■□□□□ 0.01
Atf6F6VAN0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Atf6F6VAN0 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.09■□□□□ 0.01
Atf6F6VAN0 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atf6F6VAN0 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.09■□□□□ 0.01
Atf6F6VAN0 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.09■□□□□ 0.01
Atf6F6VAN0 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atf6F6VAN0 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.09■□□□□ 0.01
Atf6F6VAN0 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Atf6F6VAN0 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Atf6F6VAN0 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.09■□□□□ 0.01
Atf6F6VAN0 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.09■□□□□ 0.01
Atf6F6VAN0 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atf6F6VAN0 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Atf6F6VAN0 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.09■□□□□ 0.01
Atf6F6VAN0 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atf6F6VAN0 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Atf6F6VAN0 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Atf6F6VAN0 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Atf6F6VAN0 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Atf6F6VAN0 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.08■□□□□ 0
Atf6F6VAN0 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.08■□□□□ 0
Atf6F6VAN0 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Atf6F6VAN0 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Atf6F6VAN0 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.08■□□□□ 0
Atf6F6VAN0 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Atf6F6VAN0 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.08■□□□□ 0
Atf6F6VAN0 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Atf6F6VAN0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Atf6F6VAN0 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Atf6F6VAN0 Gm17968-201ENSMUST00000194902 784 ntBASIC15.08■□□□□ 0
Atf6F6VAN0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.08■□□□□ 0
Atf6F6VAN0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.08■□□□□ 0
Atf6F6VAN0 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.08■□□□□ 0
Atf6F6VAN0 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.08■□□□□ 0
Atf6F6VAN0 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Atf6F6VAN0 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Atf6F6VAN0 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.08■□□□□ 0
Atf6F6VAN0 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Atf6F6VAN0 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Atf6F6VAN0 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Atf6F6VAN0 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Atf6F6VAN0 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Atf6F6VAN0 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.08■□□□□ 0
Atf6F6VAN0 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.07■□□□□ 0
Atf6F6VAN0 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Atf6F6VAN0 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Atf6F6VAN0 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.07■□□□□ 0
Atf6F6VAN0 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Atf6F6VAN0 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Atf6F6VAN0 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Atf6F6VAN0 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Atf6F6VAN0 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Atf6F6VAN0 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Atf6F6VAN0 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.07■□□□□ 0
Atf6F6VAN0 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.07■□□□□ 0
Atf6F6VAN0 Gm13464-201ENSMUST00000119418 935 ntBASIC15.07■□□□□ 0
Atf6F6VAN0 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.07■□□□□ 0
Atf6F6VAN0 Gm9727-201ENSMUST00000161387 555 ntBASIC15.07■□□□□ 0
Atf6F6VAN0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Atf6F6VAN0 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Atf6F6VAN0 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.07■□□□□ 0
Atf6F6VAN0 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Atf6F6VAN0 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Atf6F6VAN0 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Atf6F6VAN0 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Atf6F6VAN0 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Atf6F6VAN0 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms