Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a3E9PWQ3 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a3E9PWQ3 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a3E9PWQ3 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a3E9PWQ3 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Col6a3E9PWQ3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a3E9PWQ3 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a3E9PWQ3 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.42□□□□□ -0.1
Col6a3E9PWQ3 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a3E9PWQ3 Gm17795-201ENSMUST00000214505 757 ntBASIC14.42□□□□□ -0.1
Col6a3E9PWQ3 Gm7046-201ENSMUST00000221351 977 ntBASIC14.42□□□□□ -0.1
Col6a3E9PWQ3 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.42□□□□□ -0.1
Col6a3E9PWQ3 Gm43081-201ENSMUST00000199082 1380 ntBASIC14.42□□□□□ -0.1
Col6a3E9PWQ3 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a3E9PWQ3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a3E9PWQ3 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a3E9PWQ3 Gm4271-201ENSMUST00000174444 973 ntBASIC14.42□□□□□ -0.1
Col6a3E9PWQ3 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.42□□□□□ -0.1
Col6a3E9PWQ3 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC14.42□□□□□ -0.1
Col6a3E9PWQ3 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.42□□□□□ -0.1
Col6a3E9PWQ3 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.42□□□□□ -0.1
Col6a3E9PWQ3 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a3E9PWQ3 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a3E9PWQ3 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a3E9PWQ3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Col6a3E9PWQ3 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a3E9PWQ3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a3E9PWQ3 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a3E9PWQ3 Gm20392-201ENSMUST00000173047 701 ntBASIC14.41□□□□□ -0.1
Col6a3E9PWQ3 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Col6a3E9PWQ3 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC14.41□□□□□ -0.1
Col6a3E9PWQ3 Gstp-ps-201ENSMUST00000195526 631 ntBASIC14.41□□□□□ -0.1
Col6a3E9PWQ3 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Col6a3E9PWQ3 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a3E9PWQ3 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a3E9PWQ3 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Col6a3E9PWQ3 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a3E9PWQ3 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Col6a3E9PWQ3 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Col6a3E9PWQ3 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a3E9PWQ3 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a3E9PWQ3 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a3E9PWQ3 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a3E9PWQ3 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.41□□□□□ -0.1
Col6a3E9PWQ3 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a3E9PWQ3 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a3E9PWQ3 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a3E9PWQ3 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Col6a3E9PWQ3 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a3E9PWQ3 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.41□□□□□ -0.1
Col6a3E9PWQ3 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Col6a3E9PWQ3 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC14.4□□□□□ -0.1
Col6a3E9PWQ3 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Col6a3E9PWQ3 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.4□□□□□ -0.1
Col6a3E9PWQ3 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.4□□□□□ -0.1
Col6a3E9PWQ3 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Col6a3E9PWQ3 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a3E9PWQ3 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a3E9PWQ3 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a3E9PWQ3 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a3E9PWQ3 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a3E9PWQ3 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a3E9PWQ3 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a3E9PWQ3 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a3E9PWQ3 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a3E9PWQ3 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.4□□□□□ -0.1
Col6a3E9PWQ3 Gm12217-201ENSMUST00000118858 696 ntBASIC14.4□□□□□ -0.1
Col6a3E9PWQ3 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.4□□□□□ -0.1
Col6a3E9PWQ3 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.4□□□□□ -0.1
Col6a3E9PWQ3 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a3E9PWQ3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a3E9PWQ3 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.4□□□□□ -0.1
Col6a3E9PWQ3 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a3E9PWQ3 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a3E9PWQ3 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Col6a3E9PWQ3 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a3E9PWQ3 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a3E9PWQ3 Gm15240-201ENSMUST00000118156 720 ntBASIC14.4□□□□□ -0.1
Col6a3E9PWQ3 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC14.4□□□□□ -0.1
Col6a3E9PWQ3 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a3E9PWQ3 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Col6a3E9PWQ3 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14.4□□□□□ -0.1
Col6a3E9PWQ3 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC14.4□□□□□ -0.1
Col6a3E9PWQ3 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a3E9PWQ3 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a3E9PWQ3 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a3E9PWQ3 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a3E9PWQ3 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a3E9PWQ3 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a3E9PWQ3 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a3E9PWQ3 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a3E9PWQ3 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Col6a3E9PWQ3 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC14.39□□□□□ -0.11
Col6a3E9PWQ3 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.39□□□□□ -0.11
Col6a3E9PWQ3 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a3E9PWQ3 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Col6a3E9PWQ3 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.39□□□□□ -0.11
Col6a3E9PWQ3 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC14.39□□□□□ -0.11
Col6a3E9PWQ3 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.39□□□□□ -0.11
Col6a3E9PWQ3 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms