Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.53■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.53■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.53■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.53■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.53■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.53■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.53■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.52■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.52■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.52■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Gm24158-201ENSMUST00000175263 71 ntBASIC15.52■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Olfr286-202ENSMUST00000205305 969 ntBASIC15.52■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.52■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.51■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Gm10253-201ENSMUST00000194270 940 ntBASIC15.51■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.51■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Gm9182-201ENSMUST00000217829 639 ntBASIC15.51■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.51■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.51■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms