Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Rprl3-201ENSMUST00000157400 290 ntBASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Gm7889-201ENSMUST00000185591 958 ntBASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Gm44454-201ENSMUST00000198541 138 ntBASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 AC122024.2-201ENSMUST00000220086 871 ntBASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 Trav13-3-201ENSMUST00000117226 336 ntBASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 Gm9484-201ENSMUST00000195892 1159 ntBASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 AC093926.2-201ENSMUST00000214468 1228 ntBASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv3A0A0A6YYE2 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.3□□□□□ -0.6
Trbv3A0A0A6YYE2 Gm9013-201ENSMUST00000132939 882 ntBASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms