Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav18A0A075B656 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.06□□□□□ -0.48
Trav18A0A075B656 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Trav18A0A075B656 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.06□□□□□ -0.48
Trav18A0A075B656 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav18A0A075B656 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.06□□□□□ -0.48
Trav18A0A075B656 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav18A0A075B656 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav18A0A075B656 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav18A0A075B656 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav18A0A075B656 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav18A0A075B656 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav18A0A075B656 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav18A0A075B656 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav18A0A075B656 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav18A0A075B656 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav18A0A075B656 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav18A0A075B656 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.05□□□□□ -0.48
Trav18A0A075B656 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav18A0A075B656 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav18A0A075B656 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav18A0A075B656 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav18A0A075B656 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav18A0A075B656 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav18A0A075B656 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav18A0A075B656 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav18A0A075B656 Gm11764-201ENSMUST00000120221 623 ntBASIC12.05□□□□□ -0.48
Trav18A0A075B656 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav18A0A075B656 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav18A0A075B656 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav18A0A075B656 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav18A0A075B656 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav18A0A075B656 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav18A0A075B656 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav18A0A075B656 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav18A0A075B656 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Trav18A0A075B656 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.05□□□□□ -0.48
Trav18A0A075B656 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav18A0A075B656 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.05□□□□□ -0.48
Trav18A0A075B656 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav18A0A075B656 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav18A0A075B656 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav18A0A075B656 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav18A0A075B656 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav18A0A075B656 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav18A0A075B656 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav18A0A075B656 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav18A0A075B656 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav18A0A075B656 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav18A0A075B656 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav18A0A075B656 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav18A0A075B656 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav18A0A075B656 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav18A0A075B656 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav18A0A075B656 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav18A0A075B656 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.04□□□□□ -0.48
Trav18A0A075B656 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav18A0A075B656 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav18A0A075B656 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav18A0A075B656 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav18A0A075B656 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav18A0A075B656 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav18A0A075B656 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav18A0A075B656 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms