Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Gm15693-201ENSMUST00000120470 637 ntBASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Gm22175-201ENSMUST00000175007 78 ntBASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Olfr286-202ENSMUST00000205305 969 ntBASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-1A0A075B5Z7 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-1A0A075B5Z7 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Trav5-1A0A075B5Z7 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-1A0A075B5Z7 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-1A0A075B5Z7 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-1A0A075B5Z7 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-1A0A075B5Z7 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-1A0A075B5Z7 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-1A0A075B5Z7 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav5-1A0A075B5Z7 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.6□□□□□ -0.39
Trav5-1A0A075B5Z7 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-1A0A075B5Z7 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-1A0A075B5Z7 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav5-1A0A075B5Z7 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.6□□□□□ -0.39
Trav5-1A0A075B5Z7 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav5-1A0A075B5Z7 Gm5779-201ENSMUST00000218467 910 ntBASIC12.6□□□□□ -0.39
Trav5-1A0A075B5Z7 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-1A0A075B5Z7 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-1A0A075B5Z7 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-1A0A075B5Z7 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-1A0A075B5Z7 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-1A0A075B5Z7 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav5-1A0A075B5Z7 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-1A0A075B5Z7 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-1A0A075B5Z7 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-1A0A075B5Z7 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-1A0A075B5Z7 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-1A0A075B5Z7 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-1A0A075B5Z7 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-1A0A075B5Z7 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-1A0A075B5Z7 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-1A0A075B5Z7 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-1A0A075B5Z7 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-1A0A075B5Z7 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-1A0A075B5Z7 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-1A0A075B5Z7 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms