Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim39Q9ESN2 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim39Q9ESN2 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim39Q9ESN2 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim39Q9ESN2 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim39Q9ESN2 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.81□□□□□ -0.2
Trim39Q9ESN2 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trim39Q9ESN2 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim39Q9ESN2 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim39Q9ESN2 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim39Q9ESN2 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim39Q9ESN2 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim39Q9ESN2 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim39Q9ESN2 Gm6089-201ENSMUST00000197666 938 ntBASIC13.81□□□□□ -0.2
Trim39Q9ESN2 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.81□□□□□ -0.2
Trim39Q9ESN2 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trim39Q9ESN2 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim39Q9ESN2 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim39Q9ESN2 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trim39Q9ESN2 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim39Q9ESN2 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim39Q9ESN2 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim39Q9ESN2 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim39Q9ESN2 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim39Q9ESN2 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.81□□□□□ -0.2
Trim39Q9ESN2 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim39Q9ESN2 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.81□□□□□ -0.2
Trim39Q9ESN2 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim39Q9ESN2 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 Gm13884-201ENSMUST00000118103 829 ntBASIC13.8□□□□□ -0.2
Trim39Q9ESN2 Gm15173-201ENSMUST00000122049 433 ntBASIC13.8□□□□□ -0.2
Trim39Q9ESN2 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.8□□□□□ -0.2
Trim39Q9ESN2 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim39Q9ESN2 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim39Q9ESN2 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim39Q9ESN2 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trim39Q9ESN2 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim39Q9ESN2 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim39Q9ESN2 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim39Q9ESN2 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim39Q9ESN2 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim39Q9ESN2 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trim39Q9ESN2 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Trim39Q9ESN2 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim39Q9ESN2 Efs-202ENSMUST00000227037 2540 ntBASIC13.79□□□□□ -0.2
Trim39Q9ESN2 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim39Q9ESN2 Gm12134-201ENSMUST00000122109 520 ntBASIC13.79□□□□□ -0.2
Trim39Q9ESN2 Gm28659-201ENSMUST00000188013 759 ntBASIC13.79□□□□□ -0.2
Trim39Q9ESN2 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trim39Q9ESN2 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.79□□□□□ -0.2
Trim39Q9ESN2 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim39Q9ESN2 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim39Q9ESN2 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim39Q9ESN2 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim39Q9ESN2 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Trim39Q9ESN2 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim39Q9ESN2 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim39Q9ESN2 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim39Q9ESN2 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim39Q9ESN2 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim39Q9ESN2 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trim39Q9ESN2 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim39Q9ESN2 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim39Q9ESN2 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim39Q9ESN2 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms