Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Tubb3Q9ERD7 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.65□□□□□ -0.06
Tubb3Q9ERD7 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.65□□□□□ -0.06
Tubb3Q9ERD7 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Tubb3Q9ERD7 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tubb3Q9ERD7 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tubb3Q9ERD7 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Tubb3Q9ERD7 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tubb3Q9ERD7 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tubb3Q9ERD7 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Tubb3Q9ERD7 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tubb3Q9ERD7 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Tubb3Q9ERD7 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Tubb3Q9ERD7 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubb3Q9ERD7 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubb3Q9ERD7 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Tubb3Q9ERD7 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Tubb3Q9ERD7 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubb3Q9ERD7 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubb3Q9ERD7 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubb3Q9ERD7 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Tubb3Q9ERD7 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Tubb3Q9ERD7 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubb3Q9ERD7 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubb3Q9ERD7 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubb3Q9ERD7 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.64□□□□□ -0.07
Tubb3Q9ERD7 Gm43575-201ENSMUST00000196420 516 ntBASIC14.64□□□□□ -0.07
Tubb3Q9ERD7 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Tubb3Q9ERD7 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubb3Q9ERD7 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubb3Q9ERD7 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubb3Q9ERD7 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Tubb3Q9ERD7 Gm10175-201ENSMUST00000086013 645 ntBASIC14.64□□□□□ -0.07
Tubb3Q9ERD7 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubb3Q9ERD7 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Tubb3Q9ERD7 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubb3Q9ERD7 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubb3Q9ERD7 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubb3Q9ERD7 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubb3Q9ERD7 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubb3Q9ERD7 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubb3Q9ERD7 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Tubb3Q9ERD7 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.64□□□□□ -0.07
Tubb3Q9ERD7 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Tubb3Q9ERD7 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Tubb3Q9ERD7 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms