Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.75□□□□□ -0.05
Vps35Q9EQH3 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.75□□□□□ -0.05
Vps35Q9EQH3 Gm25911-201ENSMUST00000157621 56 ntBASIC14.75□□□□□ -0.05
Vps35Q9EQH3 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.75□□□□□ -0.05
Vps35Q9EQH3 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Vps35Q9EQH3 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.75□□□□□ -0.05
Vps35Q9EQH3 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps35Q9EQH3 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps35Q9EQH3 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps35Q9EQH3 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps35Q9EQH3 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps35Q9EQH3 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vps35Q9EQH3 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.75□□□□□ -0.05
Vps35Q9EQH3 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps35Q9EQH3 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vps35Q9EQH3 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.75□□□□□ -0.05
Vps35Q9EQH3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps35Q9EQH3 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps35Q9EQH3 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps35Q9EQH3 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps35Q9EQH3 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Vps35Q9EQH3 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps35Q9EQH3 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps35Q9EQH3 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps35Q9EQH3 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps35Q9EQH3 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps35Q9EQH3 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps35Q9EQH3 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps35Q9EQH3 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps35Q9EQH3 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vps35Q9EQH3 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps35Q9EQH3 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vps35Q9EQH3 Gm4995-201ENSMUST00000117247 432 ntBASIC14.74□□□□□ -0.05
Vps35Q9EQH3 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.74□□□□□ -0.05
Vps35Q9EQH3 Gm11594-201ENSMUST00000122313 162 ntBASIC14.74□□□□□ -0.05
Vps35Q9EQH3 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.74□□□□□ -0.05
Vps35Q9EQH3 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.74□□□□□ -0.05
Vps35Q9EQH3 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps35Q9EQH3 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps35Q9EQH3 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps35Q9EQH3 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps35Q9EQH3 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps35Q9EQH3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.74□□□□□ -0.05
Vps35Q9EQH3 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vps35Q9EQH3 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps35Q9EQH3 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vps35Q9EQH3 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vps35Q9EQH3 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps35Q9EQH3 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.74□□□□□ -0.05
Vps35Q9EQH3 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vps35Q9EQH3 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps35Q9EQH3 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Vps35Q9EQH3 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps35Q9EQH3 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Vps35Q9EQH3 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Vps35Q9EQH3 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.73□□□□□ -0.05
Vps35Q9EQH3 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.73□□□□□ -0.05
Vps35Q9EQH3 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps35Q9EQH3 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vps35Q9EQH3 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps35Q9EQH3 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vps35Q9EQH3 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.73□□□□□ -0.05
Vps35Q9EQH3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps35Q9EQH3 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.73□□□□□ -0.05
Vps35Q9EQH3 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.73□□□□□ -0.05
Vps35Q9EQH3 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.73□□□□□ -0.05
Vps35Q9EQH3 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vps35Q9EQH3 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps35Q9EQH3 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps35Q9EQH3 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps35Q9EQH3 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps35Q9EQH3 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps35Q9EQH3 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vps35Q9EQH3 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vps35Q9EQH3 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps35Q9EQH3 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Vps35Q9EQH3 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vps35Q9EQH3 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Vps35Q9EQH3 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps35Q9EQH3 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps35Q9EQH3 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps35Q9EQH3 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps35Q9EQH3 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps35Q9EQH3 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps35Q9EQH3 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Vps35Q9EQH3 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps35Q9EQH3 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vps35Q9EQH3 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps35Q9EQH3 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps35Q9EQH3 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vps35Q9EQH3 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps35Q9EQH3 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vps35Q9EQH3 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.72□□□□□ -0.05
Vps35Q9EQH3 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.72□□□□□ -0.05
Vps35Q9EQH3 Gm2213-201ENSMUST00000197485 688 ntBASIC14.72□□□□□ -0.05
Vps35Q9EQH3 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.72□□□□□ -0.05
Vps35Q9EQH3 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.72□□□□□ -0.05
Vps35Q9EQH3 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.72□□□□□ -0.05
Vps35Q9EQH3 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.72□□□□□ -0.05
Vps35Q9EQH3 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms