Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim13Q9CYB0 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.64□□□□□ -0.23
Trim13Q9CYB0 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim13Q9CYB0 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.64□□□□□ -0.23
Trim13Q9CYB0 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim13Q9CYB0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.64□□□□□ -0.23
Trim13Q9CYB0 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.64□□□□□ -0.23
Trim13Q9CYB0 Gm12497-201ENSMUST00000138778 237 ntBASIC13.64□□□□□ -0.23
Trim13Q9CYB0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trim13Q9CYB0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim13Q9CYB0 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim13Q9CYB0 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim13Q9CYB0 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.64□□□□□ -0.23
Trim13Q9CYB0 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim13Q9CYB0 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim13Q9CYB0 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim13Q9CYB0 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim13Q9CYB0 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Trim13Q9CYB0 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim13Q9CYB0 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim13Q9CYB0 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trim13Q9CYB0 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim13Q9CYB0 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim13Q9CYB0 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim13Q9CYB0 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim13Q9CYB0 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trim13Q9CYB0 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim13Q9CYB0 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim13Q9CYB0 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim13Q9CYB0 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim13Q9CYB0 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trim13Q9CYB0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.63□□□□□ -0.23
Trim13Q9CYB0 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.63□□□□□ -0.23
Trim13Q9CYB0 Gm15165-201ENSMUST00000118140 502 ntBASIC13.63□□□□□ -0.23
Trim13Q9CYB0 Gm4459-201ENSMUST00000118750 468 ntBASIC13.63□□□□□ -0.23
Trim13Q9CYB0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim13Q9CYB0 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trim13Q9CYB0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Trim13Q9CYB0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim13Q9CYB0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim13Q9CYB0 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim13Q9CYB0 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim13Q9CYB0 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim13Q9CYB0 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim13Q9CYB0 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim13Q9CYB0 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim13Q9CYB0 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim13Q9CYB0 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim13Q9CYB0 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim13Q9CYB0 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim13Q9CYB0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim13Q9CYB0 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim13Q9CYB0 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim13Q9CYB0 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim13Q9CYB0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim13Q9CYB0 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim13Q9CYB0 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim13Q9CYB0 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trim13Q9CYB0 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim13Q9CYB0 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim13Q9CYB0 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.62□□□□□ -0.23
Trim13Q9CYB0 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim13Q9CYB0 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim13Q9CYB0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim13Q9CYB0 Gm12008-201ENSMUST00000117791 755 ntBASIC13.62□□□□□ -0.23
Trim13Q9CYB0 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim13Q9CYB0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Trim13Q9CYB0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Trim13Q9CYB0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Trim13Q9CYB0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.62□□□□□ -0.23
Trim13Q9CYB0 Gm27704-201ENSMUST00000185094 107 ntBASIC13.62□□□□□ -0.23
Trim13Q9CYB0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim13Q9CYB0 Gm21362-201ENSMUST00000194272 928 ntBASIC13.62□□□□□ -0.23
Trim13Q9CYB0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim13Q9CYB0 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trim13Q9CYB0 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim13Q9CYB0 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim13Q9CYB0 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim13Q9CYB0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim13Q9CYB0 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trim13Q9CYB0 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim13Q9CYB0 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim13Q9CYB0 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim13Q9CYB0 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim13Q9CYB0 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim13Q9CYB0 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim13Q9CYB0 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim13Q9CYB0 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim13Q9CYB0 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim13Q9CYB0 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trim13Q9CYB0 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim13Q9CYB0 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim13Q9CYB0 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim13Q9CYB0 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim13Q9CYB0 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim13Q9CYB0 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim13Q9CYB0 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim13Q9CYB0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim13Q9CYB0 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trim13Q9CYB0 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms