Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc3Q9CWU5 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc3Q9CWU5 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc3Q9CWU5 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
Khdc3Q9CWU5 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc3Q9CWU5 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc3Q9CWU5 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc3Q9CWU5 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc3Q9CWU5 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc3Q9CWU5 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc3Q9CWU5 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.13□□□□□ -0.15
Khdc3Q9CWU5 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc3Q9CWU5 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc3Q9CWU5 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.13□□□□□ -0.15
Khdc3Q9CWU5 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.13□□□□□ -0.15
Khdc3Q9CWU5 Psmb5-202ENSMUST00000227257 622 ntBASIC14.13□□□□□ -0.15
Khdc3Q9CWU5 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc3Q9CWU5 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
Khdc3Q9CWU5 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc3Q9CWU5 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc3Q9CWU5 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc3Q9CWU5 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc3Q9CWU5 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Khdc3Q9CWU5 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.13□□□□□ -0.15
Khdc3Q9CWU5 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc3Q9CWU5 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc3Q9CWU5 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.13□□□□□ -0.15
Khdc3Q9CWU5 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc3Q9CWU5 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc3Q9CWU5 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc3Q9CWU5 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc3Q9CWU5 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Khdc3Q9CWU5 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.12□□□□□ -0.15
Khdc3Q9CWU5 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.12□□□□□ -0.15
Khdc3Q9CWU5 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc3Q9CWU5 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc3Q9CWU5 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc3Q9CWU5 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc3Q9CWU5 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.12□□□□□ -0.15
Khdc3Q9CWU5 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc3Q9CWU5 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.12□□□□□ -0.15
Khdc3Q9CWU5 Gm1401-201ENSMUST00000122048 772 ntBASIC14.12□□□□□ -0.15
Khdc3Q9CWU5 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc3Q9CWU5 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.12□□□□□ -0.15
Khdc3Q9CWU5 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.12□□□□□ -0.15
Khdc3Q9CWU5 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.12□□□□□ -0.15
Khdc3Q9CWU5 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc3Q9CWU5 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc3Q9CWU5 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc3Q9CWU5 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc3Q9CWU5 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc3Q9CWU5 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Khdc3Q9CWU5 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc3Q9CWU5 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc3Q9CWU5 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc3Q9CWU5 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc3Q9CWU5 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc3Q9CWU5 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Gm5364-201ENSMUST00000216789 889 ntBASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc3Q9CWU5 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms