Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rab28Q99KL7 Gm9182-201ENSMUST00000217829 639 ntBASIC14.22□□□□□ -0.13
Rab28Q99KL7 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab28Q99KL7 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab28Q99KL7 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab28Q99KL7 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab28Q99KL7 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rab28Q99KL7 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab28Q99KL7 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab28Q99KL7 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab28Q99KL7 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab28Q99KL7 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab28Q99KL7 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab28Q99KL7 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab28Q99KL7 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab28Q99KL7 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab28Q99KL7 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab28Q99KL7 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rab28Q99KL7 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rab28Q99KL7 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab28Q99KL7 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rab28Q99KL7 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab28Q99KL7 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab28Q99KL7 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab28Q99KL7 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab28Q99KL7 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.21□□□□□ -0.13
Rab28Q99KL7 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Rab28Q99KL7 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab28Q99KL7 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Rab28Q99KL7 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab28Q99KL7 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.21□□□□□ -0.13
Rab28Q99KL7 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rab28Q99KL7 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.21□□□□□ -0.13
Rab28Q99KL7 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rab28Q99KL7 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab28Q99KL7 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Rab28Q99KL7 Gm8396-201ENSMUST00000057361 823 ntBASIC14.21□□□□□ -0.13
Rab28Q99KL7 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rab28Q99KL7 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab28Q99KL7 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab28Q99KL7 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab28Q99KL7 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rab28Q99KL7 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab28Q99KL7 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab28Q99KL7 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Rab28Q99KL7 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Rab28Q99KL7 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rab28Q99KL7 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rab28Q99KL7 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Rab28Q99KL7 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rab28Q99KL7 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rab28Q99KL7 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rab28Q99KL7 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab28Q99KL7 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab28Q99KL7 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.2□□□□□ -0.14
Rab28Q99KL7 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rab28Q99KL7 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab28Q99KL7 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rab28Q99KL7 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab28Q99KL7 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab28Q99KL7 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rab28Q99KL7 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab28Q99KL7 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab28Q99KL7 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rab28Q99KL7 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.2□□□□□ -0.14
Rab28Q99KL7 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab28Q99KL7 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Rab28Q99KL7 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Rab28Q99KL7 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab28Q99KL7 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.2□□□□□ -0.14
Rab28Q99KL7 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab28Q99KL7 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab28Q99KL7 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab28Q99KL7 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab28Q99KL7 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab28Q99KL7 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.2□□□□□ -0.14
Rab28Q99KL7 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rab28Q99KL7 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.2□□□□□ -0.14
Rab28Q99KL7 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab28Q99KL7 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab28Q99KL7 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab28Q99KL7 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab28Q99KL7 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rab28Q99KL7 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rab28Q99KL7 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab28Q99KL7 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab28Q99KL7 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.19□□□□□ -0.14
Rab28Q99KL7 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab28Q99KL7 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab28Q99KL7 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.19□□□□□ -0.14
Rab28Q99KL7 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rab28Q99KL7 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab28Q99KL7 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab28Q99KL7 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.19□□□□□ -0.14
Rab28Q99KL7 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.19□□□□□ -0.14
Rab28Q99KL7 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.19□□□□□ -0.14
Rab28Q99KL7 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.19□□□□□ -0.14
Rab28Q99KL7 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.19□□□□□ -0.14
Rab28Q99KL7 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rab28Q99KL7 Gm5312-201ENSMUST00000203728 547 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms