Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk9Q99J95 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk9Q99J95 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk9Q99J95 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.86□□□□□ -0.03
Cdk9Q99J95 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk9Q99J95 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk9Q99J95 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk9Q99J95 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk9Q99J95 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk9Q99J95 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk9Q99J95 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk9Q99J95 Rprl3-201ENSMUST00000157400 290 ntBASIC14.86□□□□□ -0.03
Cdk9Q99J95 Gm18669-201ENSMUST00000216049 778 ntBASIC14.86□□□□□ -0.03
Cdk9Q99J95 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.86□□□□□ -0.03
Cdk9Q99J95 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk9Q99J95 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk9Q99J95 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk9Q99J95 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk9Q99J95 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk9Q99J95 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk9Q99J95 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk9Q99J95 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk9Q99J95 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk9Q99J95 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk9Q99J95 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk9Q99J95 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk9Q99J95 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.86□□□□□ -0.03
Cdk9Q99J95 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk9Q99J95 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk9Q99J95 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk9Q99J95 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdk9Q99J95 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cdk9Q99J95 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdk9Q99J95 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Cdk9Q99J95 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdk9Q99J95 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Cdk9Q99J95 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdk9Q99J95 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.85□□□□□ -0.03
Cdk9Q99J95 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdk9Q99J95 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Cdk9Q99J95 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.85□□□□□ -0.03
Cdk9Q99J95 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdk9Q99J95 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.85□□□□□ -0.03
Cdk9Q99J95 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdk9Q99J95 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Cdk9Q99J95 Gm44454-201ENSMUST00000198541 138 ntBASIC14.85□□□□□ -0.03
Cdk9Q99J95 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cdk9Q99J95 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdk9Q99J95 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdk9Q99J95 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdk9Q99J95 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdk9Q99J95 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.85□□□□□ -0.03
Cdk9Q99J95 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdk9Q99J95 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdk9Q99J95 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cdk9Q99J95 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdk9Q99J95 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.85□□□□□ -0.03
Cdk9Q99J95 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.84□□□□□ -0.03
Cdk9Q99J95 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk9Q99J95 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cdk9Q99J95 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Cdk9Q99J95 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk9Q99J95 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk9Q99J95 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk9Q99J95 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk9Q99J95 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk9Q99J95 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk9Q99J95 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk9Q99J95 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk9Q99J95 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk9Q99J95 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.84□□□□□ -0.03
Cdk9Q99J95 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk9Q99J95 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Cdk9Q99J95 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk9Q99J95 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk9Q99J95 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cdk9Q99J95 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk9Q99J95 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk9Q99J95 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk9Q99J95 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk9Q99J95 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk9Q99J95 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.84□□□□□ -0.03
Cdk9Q99J95 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk9Q99J95 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk9Q99J95 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Cdk9Q99J95 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk9Q99J95 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Cdk9Q99J95 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cdk9Q99J95 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cdk9Q99J95 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cdk9Q99J95 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk9Q99J95 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk9Q99J95 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk9Q99J95 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk9Q99J95 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk9Q99J95 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cdk9Q99J95 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk9Q99J95 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cdk9Q99J95 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.83□□□□□ -0.04
Cdk9Q99J95 Gm8344-201ENSMUST00000119813 856 ntBASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms