Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC17.35■□□□□ 0.37
Col20a1Q923P0 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col20a1Q923P0 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Col20a1Q923P0 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col20a1Q923P0 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC17.35■□□□□ 0.37
Col20a1Q923P0 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col20a1Q923P0 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col20a1Q923P0 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col20a1Q923P0 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Col20a1Q923P0 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
Col20a1Q923P0 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col20a1Q923P0 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.35■□□□□ 0.37
Col20a1Q923P0 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col20a1Q923P0 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col20a1Q923P0 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col20a1Q923P0 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.34■□□□□ 0.37
Col20a1Q923P0 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col20a1Q923P0 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col20a1Q923P0 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Col20a1Q923P0 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col20a1Q923P0 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col20a1Q923P0 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Col20a1Q923P0 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col20a1Q923P0 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col20a1Q923P0 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col20a1Q923P0 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col20a1Q923P0 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col20a1Q923P0 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col20a1Q923P0 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col20a1Q923P0 Mir6977-201ENSMUST00000184960 64 ntBASIC17.34■□□□□ 0.37
Col20a1Q923P0 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col20a1Q923P0 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col20a1Q923P0 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col20a1Q923P0 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col20a1Q923P0 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Col20a1Q923P0 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col20a1Q923P0 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col20a1Q923P0 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col20a1Q923P0 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col20a1Q923P0 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col20a1Q923P0 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Col20a1Q923P0 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Col20a1Q923P0 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.33■□□□□ 0.37
Col20a1Q923P0 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.33■□□□□ 0.36
Col20a1Q923P0 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Col20a1Q923P0 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col20a1Q923P0 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.33■□□□□ 0.36
Col20a1Q923P0 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col20a1Q923P0 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Col20a1Q923P0 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Col20a1Q923P0 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.33■□□□□ 0.36
Col20a1Q923P0 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col20a1Q923P0 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Col20a1Q923P0 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col20a1Q923P0 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col20a1Q923P0 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col20a1Q923P0 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col20a1Q923P0 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col20a1Q923P0 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Col20a1Q923P0 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Col20a1Q923P0 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.32■□□□□ 0.36
Col20a1Q923P0 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC17.32■□□□□ 0.36
Col20a1Q923P0 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Col20a1Q923P0 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col20a1Q923P0 Gm7775-201ENSMUST00000218871 853 ntBASIC17.32■□□□□ 0.36
Col20a1Q923P0 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC17.32■□□□□ 0.36
Col20a1Q923P0 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Col20a1Q923P0 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col20a1Q923P0 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col20a1Q923P0 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col20a1Q923P0 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col20a1Q923P0 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col20a1Q923P0 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col20a1Q923P0 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col20a1Q923P0 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col20a1Q923P0 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Col20a1Q923P0 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col20a1Q923P0 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col20a1Q923P0 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col20a1Q923P0 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col20a1Q923P0 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col20a1Q923P0 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col20a1Q923P0 Gm15653-201ENSMUST00000119247 907 ntBASIC17.31■□□□□ 0.36
Col20a1Q923P0 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col20a1Q923P0 Gm27437-201ENSMUST00000183429 107 ntBASIC17.31■□□□□ 0.36
Col20a1Q923P0 Gm27631-201ENSMUST00000184163 466 ntBASIC17.31■□□□□ 0.36
Col20a1Q923P0 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.31■□□□□ 0.36
Col20a1Q923P0 AC125206.2-201ENSMUST00000217454 574 ntBASIC17.31■□□□□ 0.36
Col20a1Q923P0 Gm16476-201ENSMUST00000221544 139 ntBASIC17.31■□□□□ 0.36
Col20a1Q923P0 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.31■□□□□ 0.36
Col20a1Q923P0 Dupd1-202ENSMUST00000224735 548 ntBASIC17.31■□□□□ 0.36
Col20a1Q923P0 Shd-206ENSMUST00000225145 998 ntBASIC17.31■□□□□ 0.36
Col20a1Q923P0 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Col20a1Q923P0 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col20a1Q923P0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col20a1Q923P0 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col20a1Q923P0 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col20a1Q923P0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col20a1Q923P0 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col20a1Q923P0 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms